Atomistry » Chlorine » PDB 3ccm-3cjx » 3cj8
Atomistry »
  Chlorine »
    PDB 3ccm-3cjx »
      3cj8 »

Chlorine in PDB 3cj8: Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583

Enzymatic activity of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583

All present enzymatic activity of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583:
2.3.1.89;

Protein crystallography data

The structure of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583, PDB code: 3cj8 was solved by K.Tan, L.Bigelow, S.Clancy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.83 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 95.209, 55.179, 140.387, 90.00, 95.63, 90.00
R / Rfree (%) 20.1 / 24.8

Other elements in 3cj8:

The structure of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 (pdb code 3cj8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583, PDB code: 3cj8:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 1 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:23.9
occ:1.00
 N A:GLY135 3.1 29.4 1.0
O B:HOH391 3.2 25.3 1.0
ND2 A:ASN116 3.2 28.8 1.0
CA A:GLY153 3.6 30.9 1.0
O A:HOH365 3.7 30.1 1.0
CA A:GLY134 3.8 29.9 1.0
CE B:MSE129 3.8 29.6 1.0
C A:GLY134 4.0 29.3 1.0
CA A:GLY135 4.0 29.4 1.0
N A:GLY153 4.2 31.0 1.0
C A:GLY153 4.3 30.7 1.0
CG A:ASN116 4.3 29.6 1.0
O A:HOH386 4.5 30.1 1.0
CB A:ASN116 4.6 27.0 1.0
O A:GLY153 4.8 30.3 1.0
N A:VAL154 4.8 30.6 1.0
CG1 A:ILE155 4.8 31.2 1.0

Chlorine binding site 2 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 2 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl307

b:41.2
occ:1.00
 NH1 B:ARG90 3.0 27.5 1.0
NH1 A:ARG98 3.1 29.7 1.0
O A:HOH386 3.1 30.1 1.0
NH2 A:ARG98 3.2 29.3 1.0
O A:HOH478 3.2 42.2 1.0
SE B:MSE110 3.6 40.0 0.8
NH2 B:ARG90 3.6 28.6 1.0
CZ A:ARG98 3.6 29.4 1.0
CZ B:ARG90 3.7 29.2 1.0
CE B:MSE110 3.8 36.5 1.0
O B:HOH335 4.6 29.2 1.0
CD1 A:ILE79 4.6 22.9 0.5
CE B:MSE126 4.7 42.9 1.0
OE1 B:GLU92 4.7 29.8 1.0
NE A:ARG98 4.9 26.4 1.0

Chlorine binding site 3 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 3 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:25.2
occ:1.00
 N B:GLY135 3.1 28.7 1.0
ND2 B:ASN116 3.2 29.1 1.0
O C:HOH359 3.3 24.4 1.0
O B:HOH374 3.6 29.3 1.0
CA B:GLY153 3.6 31.4 1.0
CA B:GLY134 3.9 28.7 1.0
C B:GLY134 4.0 28.9 1.0
CE C:MSE129 4.0 30.9 1.0
CA B:GLY135 4.0 30.1 1.0
C B:GLY153 4.3 31.1 1.0
N B:GLY153 4.3 31.3 1.0
CG B:ASN116 4.3 29.6 1.0
O C:HOH484 4.4 29.0 1.0
O B:HOH466 4.6 31.5 1.0
O B:HOH360 4.6 24.0 1.0
CB B:ASN116 4.6 28.2 1.0
N B:VAL154 4.7 30.7 1.0
CG1 B:ILE155 4.8 34.5 1.0
O B:GLY153 4.8 30.6 1.0

Chlorine binding site 4 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 4 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl305

b:35.9
occ:1.00
 NH1 B:ARG98 3.0 30.8 1.0
NH1 C:ARG90 3.0 28.5 1.0
NH2 B:ARG98 3.1 27.9 1.0
O B:HOH466 3.1 31.5 1.0
O B:HOH360 3.1 24.0 1.0
CZ B:ARG98 3.5 30.2 1.0
SE C:MSE110 3.6 35.8 0.8
CE C:MSE110 3.7 35.9 1.0
NH2 C:ARG90 3.8 25.8 1.0
CZ C:ARG90 3.8 29.5 1.0
O C:HOH367 4.2 26.4 1.0
CD1 B:ILE79 4.3 26.0 1.0
OE1 C:GLU92 4.7 28.8 1.0
NE B:ARG98 4.8 24.7 1.0

Chlorine binding site 5 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 5 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl303

b:25.8
occ:1.00
 N C:GLY135 3.0 27.6 1.0
ND2 C:ASN116 3.1 29.5 1.0
O A:HOH353 3.3 25.1 1.0
O C:HOH342 3.5 28.8 1.0
CA C:GLY153 3.6 31.9 1.0
CA C:GLY134 3.7 27.8 1.0
CE A:MSE129 3.8 28.4 1.0
C C:GLY134 3.8 28.0 1.0
CA C:GLY135 4.0 28.1 1.0
CG C:ASN116 4.3 30.6 1.0
N C:GLY153 4.3 31.9 1.0
C C:GLY153 4.3 31.5 1.0
CB C:ASN116 4.5 28.6 1.0
O C:HOH464 4.7 30.8 1.0
CG1 C:ILE155 4.8 32.9 1.0
O C:GLY153 4.8 31.3 1.0
O A:HOH321 4.8 22.9 1.0
N C:VAL154 4.8 31.3 1.0

Chlorine binding site 6 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 6 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl306

b:37.3
occ:1.00
 NH1 A:ARG90 3.0 25.8 1.0
O A:HOH321 3.1 22.9 1.0
O A:HOH395 3.1 37.3 1.0
NH1 C:ARG98 3.2 27.7 1.0
NH2 C:ARG98 3.3 26.0 1.0
NH2 A:ARG90 3.6 27.6 1.0
SE A:MSE110 3.6 39.0 0.8
CZ A:ARG90 3.7 27.1 1.0
CZ C:ARG98 3.7 27.5 1.0
CE A:MSE110 3.9 36.5 1.0
O A:HOH333 4.0 26.7 1.0
CD1 C:ILE79 4.4 25.1 1.0
OE1 A:GLU92 4.7 28.3 1.0
NE A:ARG90 5.0 24.9 1.0

Reference:

K.Tan, L.Bigelow, S.Clancy, A.Joachimiak. The Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N-Succinyltransferase From Enterococcus Faecalis V583. To Be Published.
Page generated: Sat Jul 20 17:32:29 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy