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Chlorine in PDB 3ck2: Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4

Protein crystallography data

The structure of Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4, PDB code: 3ck2 was solved by B.Nocek, M.Zhou, J.Abdullah, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.88 / 2.30
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 112.467, 112.467, 112.467, 90.00, 90.00, 90.00
R / Rfree (%) 14.8 / 20.3

Other elements in 3ck2:

The structure of Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4 also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4 (pdb code 3ck2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4, PDB code: 3ck2:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3ck2

Go back to Chlorine Binding Sites List in 3ck2
Chlorine binding site 1 out of 2 in the Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:31.8
occ:1.00
O A:HOH403 3.0 20.4 1.0
O A:HOH386 3.1 18.5 1.0
ND2 A:ASN57 3.3 15.3 1.0
O A:HOH416 3.3 46.3 1.0
MN A:MN202 3.5 37.1 0.4
CE1 A:HIS110 3.7 16.8 1.0
OD1 A:ASN57 3.8 22.3 1.0
CG A:ASN57 4.0 19.3 1.0
ND1 A:HIS110 4.1 18.0 1.0
CE A:MSE58 4.2 17.6 1.0
MN A:MN201 4.4 18.3 0.8
O A:HOH314 4.4 29.7 1.0
OD2 A:ASP38 4.4 20.6 1.0
CG A:MSE58 4.6 18.1 1.0
O A:HIS110 4.8 18.5 1.0
NE2 A:HIS110 4.8 17.4 1.0
O A:HOH418 4.9 30.3 1.0
O A:HOH417 4.9 46.4 1.0

Chlorine binding site 2 out of 2 in 3ck2

Go back to Chlorine Binding Sites List in 3ck2
Chlorine binding site 2 out of 2 in the Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:39.0
occ:1.00
ND2 A:ASN88 3.3 25.8 1.0
O A:HOH415 3.3 40.9 1.0
N A:ASN88 3.4 27.8 1.0
NE2 A:HIS110 3.4 17.4 1.0
N A:ILE87 3.5 26.2 1.0
CB A:ASN88 3.6 27.7 1.0
CD2 A:HIS110 3.6 17.1 1.0
CA A:ASP86 3.6 26.4 1.0
C A:ASP86 3.7 25.9 1.0
CG A:ASN88 3.9 27.5 1.0
O A:HOH417 4.0 46.4 1.0
CA A:HIS83 4.0 23.8 1.0
CA A:ASN88 4.1 27.4 1.0
O A:HIS83 4.2 26.0 1.0
N A:ASP86 4.3 26.1 1.0
C A:ILE87 4.4 27.2 1.0
CA A:ILE87 4.4 26.8 1.0
O A:GLY82 4.5 23.2 1.0
O A:ASP86 4.5 24.8 1.0
CG1 A:ILE87 4.6 26.4 1.0
C A:HIS83 4.6 24.8 1.0
CE1 A:HIS110 4.7 16.8 1.0
CB A:HIS83 4.7 23.9 1.0
CB A:ASP86 4.8 26.9 1.0
N A:HIS83 4.8 23.2 1.0
OD1 A:ASP86 4.8 30.9 1.0
CG A:HIS110 4.9 18.0 1.0
C A:GLY82 4.9 23.1 1.0

Reference:

B.Nocek, M.Zhou, J.Abdullah, A.Joachimiak. Crystal Structure of Conserved Uncharacterized Protein (Predicted Phosphoesterase COG0622) From Streptococcus Pneumoniae TIGR4. To Be Published.
Page generated: Sat Jul 20 17:34:15 2024

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