Atomistry » Chlorine » PDB 3ck1-3csv » 3csj
Atomistry »
  Chlorine »
    PDB 3ck1-3csv »
      3csj »

Chlorine in PDB 3csj: Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil

Enzymatic activity of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil

All present enzymatic activity of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil:
2.5.1.18;

Protein crystallography data

The structure of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil, PDB code: 3csj was solved by L.J.Parker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.92 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.840, 89.930, 69.070, 90.00, 97.70, 90.00
R / Rfree (%) 17.6 / 23.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil (pdb code 3csj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil, PDB code: 3csj:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3csj

Go back to Chlorine Binding Sites List in 3csj
Chlorine binding site 1 out of 3 in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl210

b:35.6
occ:0.70
O A:HOH228 2.6 17.9 1.0
O A:HOH354 2.7 33.5 1.0
O A:HOH243 3.0 23.7 1.0
O A:HOH330 3.3 30.7 1.0
N A:ARG13 3.3 9.7 1.0
CA A:GLY12 3.4 11.2 1.0
CG A:ARG13 3.5 11.7 1.0
C A:GLY12 3.6 10.2 1.0
OH A:TYR7 3.7 13.7 1.0
CB A:ARG13 4.1 10.3 1.0
O A:HOH218 4.1 10.3 1.0
CA A:ARG13 4.2 10.4 1.0
CD1 A:ILE104 4.2 16.9 1.0
CG1 A:ILE104 4.4 16.3 1.0
CD A:ARG13 4.4 12.3 1.0
O A:GLY12 4.6 10.5 1.0
NE A:ARG13 4.7 13.5 1.0
OH A:TYR108 4.8 18.7 1.0
N A:GLY12 4.8 11.7 1.0
ND2 A:ASN204 4.9 10.1 1.0

Chlorine binding site 2 out of 3 in 3csj

Go back to Chlorine Binding Sites List in 3csj
Chlorine binding site 2 out of 3 in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl211

b:41.3
occ:0.50
CL14 B:CBL211 0.0 41.3 0.5
C13 B:CBL211 1.8 39.8 0.5
C12 B:CBL211 2.7 38.4 0.5
N11 B:CBL211 3.0 36.8 0.5
C1 B:CBL211 3.3 34.3 0.5
C6 B:CBL211 3.5 33.5 0.5
O B:GLY205 3.5 24.4 1.0
C B:GLY205 3.7 22.6 1.0
C15 B:CBL211 3.9 37.4 0.5
CE1 B:TYR108 4.0 21.8 1.0
CA B:GLY205 4.1 21.5 1.0
N B:ASN206 4.2 22.7 1.0
C2 B:CBL211 4.2 32.5 0.5
CB B:ASN206 4.4 22.9 1.0
C5 B:CBL211 4.4 31.3 0.5
CA B:ASN206 4.5 22.8 1.0
CD1 B:TYR108 4.5 23.1 1.0

Chlorine binding site 3 out of 3 in 3csj

Go back to Chlorine Binding Sites List in 3csj
Chlorine binding site 3 out of 3 in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl211

b:41.3
occ:0.50
CL17 B:CBL211 0.0 41.3 0.5
C16 B:CBL211 1.8 38.3 0.5
C15 B:CBL211 2.6 37.4 0.5
CD B:PRO9 3.5 21.4 1.0
CG B:PRO9 3.8 22.2 1.0
N11 B:CBL211 4.0 36.8 0.5
CB B:PHE8 4.2 21.2 1.0
CG1 B:VAL10 4.2 19.5 1.0
N B:PRO9 4.4 21.1 1.0
C2 B:CBL211 4.7 32.5 0.5
C1 B:CBL211 4.8 34.3 0.5
O B:PRO9 4.8 19.9 1.0
C12 B:CBL211 4.8 38.4 0.5
N B:VAL35 4.8 33.5 1.0
CB B:VAL35 4.9 35.3 1.0
CG B:PHE8 4.9 22.8 1.0
C B:PRO9 5.0 20.1 1.0
CA B:PHE8 5.0 20.9 1.0

Reference:

L.J.Parker, S.Ciccone, L.C.Italiano, A.Primavera, A.J.Oakley, C.J.Morton, N.C.Hancock, M.L.Bello, M.W.Parker. The Anti-Cancer Drug Chlorambucil As A Substrate For the Human Polymorphic Enzyme Glutathione Transferase P1-1: Kinetic Properties and Crystallographic Characterisation of Allelic Variants. J.Mol.Biol. V. 380 131 2008.
ISSN: ISSN 0022-2836
PubMed: 18511072
DOI: 10.1016/J.JMB.2008.04.066
Page generated: Sat Jul 20 17:49:00 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy