Atomistry » Chlorine » PDB 3ck1-3csv » 3csj
Atomistry »
  Chlorine »
    PDB 3ck1-3csv »
      3csj »

Chlorine in PDB 3csj: Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil

Enzymatic activity of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil

All present enzymatic activity of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil:
2.5.1.18;

Protein crystallography data

The structure of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil, PDB code: 3csj was solved by L.J.Parker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.92 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.840, 89.930, 69.070, 90.00, 97.70, 90.00
R / Rfree (%) 17.6 / 23.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil (pdb code 3csj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil, PDB code: 3csj:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3csj

Go back to Chlorine Binding Sites List in 3csj
Chlorine binding site 1 out of 3 in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl210

b:35.6
occ:0.70
O A:HOH228 2.6 17.9 1.0
O A:HOH354 2.7 33.5 1.0
O A:HOH243 3.0 23.7 1.0
O A:HOH330 3.3 30.7 1.0
N A:ARG13 3.3 9.7 1.0
CA A:GLY12 3.4 11.2 1.0
CG A:ARG13 3.5 11.7 1.0
C A:GLY12 3.6 10.2 1.0
OH A:TYR7 3.7 13.7 1.0
CB A:ARG13 4.1 10.3 1.0
O A:HOH218 4.1 10.3 1.0
CA A:ARG13 4.2 10.4 1.0
CD1 A:ILE104 4.2 16.9 1.0
CG1 A:ILE104 4.4 16.3 1.0
CD A:ARG13 4.4 12.3 1.0
O A:GLY12 4.6 10.5 1.0
NE A:ARG13 4.7 13.5 1.0
OH A:TYR108 4.8 18.7 1.0
N A:GLY12 4.8 11.7 1.0
ND2 A:ASN204 4.9 10.1 1.0

Chlorine binding site 2 out of 3 in 3csj

Go back to Chlorine Binding Sites List in 3csj
Chlorine binding site 2 out of 3 in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl211

b:41.3
occ:0.50
CL14 B:CBL211 0.0 41.3 0.5
C13 B:CBL211 1.8 39.8 0.5
C12 B:CBL211 2.7 38.4 0.5
N11 B:CBL211 3.0 36.8 0.5
C1 B:CBL211 3.3 34.3 0.5
C6 B:CBL211 3.5 33.5 0.5
O B:GLY205 3.5 24.4 1.0
C B:GLY205 3.7 22.6 1.0
C15 B:CBL211 3.9 37.4 0.5
CE1 B:TYR108 4.0 21.8 1.0
CA B:GLY205 4.1 21.5 1.0
N B:ASN206 4.2 22.7 1.0
C2 B:CBL211 4.2 32.5 0.5
CB B:ASN206 4.4 22.9 1.0
C5 B:CBL211 4.4 31.3 0.5
CA B:ASN206 4.5 22.8 1.0
CD1 B:TYR108 4.5 23.1 1.0

Chlorine binding site 3 out of 3 in 3csj

Go back to Chlorine Binding Sites List in 3csj
Chlorine binding site 3 out of 3 in the Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Human Glutathione S-Transferase P1-1 in Complex with Chlorambucil within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl211

b:41.3
occ:0.50
CL17 B:CBL211 0.0 41.3 0.5
C16 B:CBL211 1.8 38.3 0.5
C15 B:CBL211 2.6 37.4 0.5
CD B:PRO9 3.5 21.4 1.0
CG B:PRO9 3.8 22.2 1.0
N11 B:CBL211 4.0 36.8 0.5
CB B:PHE8 4.2 21.2 1.0
CG1 B:VAL10 4.2 19.5 1.0
N B:PRO9 4.4 21.1 1.0
C2 B:CBL211 4.7 32.5 0.5
C1 B:CBL211 4.8 34.3 0.5
O B:PRO9 4.8 19.9 1.0
C12 B:CBL211 4.8 38.4 0.5
N B:VAL35 4.8 33.5 1.0
CB B:VAL35 4.9 35.3 1.0
CG B:PHE8 4.9 22.8 1.0
C B:PRO9 5.0 20.1 1.0
CA B:PHE8 5.0 20.9 1.0

Reference:

L.J.Parker, S.Ciccone, L.C.Italiano, A.Primavera, A.J.Oakley, C.J.Morton, N.C.Hancock, M.L.Bello, M.W.Parker. The Anti-Cancer Drug Chlorambucil As A Substrate For the Human Polymorphic Enzyme Glutathione Transferase P1-1: Kinetic Properties and Crystallographic Characterisation of Allelic Variants. J.Mol.Biol. V. 380 131 2008.
ISSN: ISSN 0022-2836
PubMed: 18511072
DOI: 10.1016/J.JMB.2008.04.066
Page generated: Sat Jul 20 17:49:00 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy