Chlorine in PDB 3ct9: Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution

The structure of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution, PDB code: 3ct9 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.51 / 2.31
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	51.340, 67.250, 107.890, 90.00, 94.28, 90.00
R / Rfree (%)	19.4 / 25.3

The structure of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution also contains other interesting chemical elements:

Iodine

(I)

8 atoms

The binding sites of Chlorine atom in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution (pdb code 3ct9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution, PDB code: 3ct9:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl359 b:49.3 occ:1.00 CA A:GLY186 3.6 38.4 1.0 C A:GLY186 3.7 37.5 1.0 N A:GLY186 3.7 38.4 1.0 O A:GLY186 3.9 37.1 1.0 N A:HIS187 4.1 37.5 1.0 ND1 A:HIS187 4.2 41.8 1.0 CE1 A:HIS187 4.2 41.8 1.0 CG1 A:VAL237 4.5 31.7 1.0 C A:ALA185 4.6 37.9 1.0 CB A:ALA185 4.6 35.7 1.0 NE2 A:HIS187 4.8 41.5 1.0 CG A:HIS187 4.8 41.1 1.0 CA A:HIS187 4.9 37.2 1.0

Chlorine binding site 2 out of 6 in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl360 b:46.2 occ:1.00 CB A:ALA315 3.6 31.1 1.0 N A:ASP284 3.8 38.3 1.0 CB A:ASP284 4.1 39.2 1.0 CD2 A:HIS287 4.2 37.0 1.0 CG1 A:ILE283 4.3 36.8 1.0 CA A:ASP284 4.6 37.8 1.0 CA A:ILE283 4.6 37.2 1.0 C A:ILE283 4.7 38.2 1.0 CG A:HIS287 5.0 37.2 1.0 CB A:HIS287 5.0 36.1 1.0

Chlorine binding site 3 out of 6 in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl361 b:53.8 occ:1.00 O A:ALA273 3.4 36.8 1.0 NZ A:LYS272 3.8 46.9 1.0 CE A:LYS272 3.9 46.9 1.0 CE2 A:PHE276 4.0 33.1 1.0 O A:HOH417 4.1 22.7 1.0 CA A:SER275 4.2 35.6 1.0 C A:ALA273 4.3 35.2 1.0 CD2 A:PHE276 4.3 33.0 1.0 O A:ARG274 4.5 34.1 1.0 N A:SER275 4.5 34.0 1.0 CZ A:PHE276 4.5 32.2 1.0 C A:ARG274 4.5 33.9 1.0 CB A:ALA273 4.7 36.0 1.0 O A:HOH385 4.8 22.7 1.0 C A:SER275 4.9 34.6 1.0 N A:PHE276 4.9 33.9 1.0 CA A:ALA273 5.0 36.2 1.0

Chlorine binding site 4 out of 6 in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl361 b:53.2 occ:1.00 CB B:HIS187 3.8 40.3 1.0 CB B:ALA189 3.9 36.8 1.0 ND2 B:ASN236 3.9 34.3 1.0 O B:ASN236 4.0 33.6 1.0 N B:ALA189 4.1 35.9 1.0 CB B:ASN236 4.1 34.9 1.0 CD2 B:HIS187 4.1 42.2 1.0 N B:ALA188 4.3 37.9 1.0 CA B:HIS187 4.3 38.5 1.0 CG B:HIS187 4.3 41.5 1.0 CG B:ASN236 4.5 36.1 1.0 CA B:ALA189 4.6 37.9 1.0 C B:HIS187 4.6 38.6 1.0 NH1 A:ARG249 4.8 44.4 1.0 C B:ASN236 4.9 33.6 1.0

Chlorine binding site 5 out of 6 in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl362 b:28.3 occ:1.00 NH2 B:ARG249 3.4 41.3 1.0 O B:HOH382 3.8 22.8 1.0 CD2 B:LEU174 3.9 28.3 1.0 NH1 B:ARG249 4.1 41.5 1.0 CB A:ASN236 4.1 36.3 1.0 CE1 A:HIS235 4.2 29.0 1.0 ND2 A:ASN236 4.2 38.8 1.0 O B:HOH383 4.2 47.0 1.0 CZ B:ARG249 4.2 40.7 1.0 CG A:ASN236 4.5 37.9 1.0 NE2 A:HIS235 4.8 28.6 1.0

Chlorine binding site 6 out of 6 in the Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Putative Zinc Peptidase (NP_812461.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.31 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl363 b:57.0 occ:1.00 O B:SER307 3.4 34.4 1.0 O B:GLU136 3.6 37.5 1.0 OG B:SER139 3.6 42.0 1.0 C B:SER307 3.8 34.8 1.0 CA B:SER139 4.0 40.9 1.0 OD1 B:ASP308 4.1 36.1 1.0 CB B:SER139 4.1 41.4 1.0 OE2 B:GLU136 4.3 39.7 1.0 N B:ASP308 4.3 34.4 1.0 CD2 B:LEU306 4.4 32.9 1.0 CG B:GLU136 4.4 38.3 1.0 CD2 B:LEU278 4.5 32.6 1.0 CA B:ASP308 4.5 34.0 1.0 CG B:LEU306 4.5 33.8 1.0 C B:GLU136 4.5 37.0 1.0 CA B:SER307 4.6 35.4 1.0 N B:SER139 4.6 40.4 1.0 CD B:GLU136 4.6 39.6 1.0 CA B:GLU136 4.7 37.3 1.0 N B:SER307 4.8 35.8 1.0 CD1 B:LEU311 4.8 31.2 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.