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Chlorine in PDB 3dbd: Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094

Enzymatic activity of Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094

All present enzymatic activity of Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094:
2.7.11.21;

Protein crystallography data

The structure of Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094, PDB code: 3dbd was solved by R.A.Elling, K.J.Barr, M.J.Romanowski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 3.05
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 135.267, 135.267, 135.267, 90.00, 90.00, 90.00
R / Rfree (%) 25 / 27.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094 (pdb code 3dbd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094, PDB code: 3dbd:

Chlorine binding site 1 out of 1 in 3dbd

Go back to Chlorine Binding Sites List in 3dbd
Chlorine binding site 1 out of 1 in the Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Activated (Thr->Asp) Polo-Like Kinase 1 (PLK1) Catalytic Domain in Complex with Compound 094 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl313

b:50.5
occ:1.00
 CL A:3FR313 0.0 50.5 1.0
C20 A:3FR313 1.8 50.6 1.0
C21 A:3FR313 2.8 50.5 1.0
C19 A:3FR313 2.8 50.5 1.0
N A:GLY48 3.7 63.9 1.0
CB A:CYS53 3.8 62.5 1.0
CB A:ALA51 3.8 68.3 1.0
CE A:LYS68 3.9 62.2 1.0
O A:ALA51 3.9 67.8 1.0
N A:CYS53 3.9 63.3 1.0
C A:ALA51 4.0 67.6 1.0
C22 A:3FR313 4.1 50.5 1.0
CG A:LYS68 4.1 62.1 1.0
C18 A:3FR313 4.1 50.3 1.0
CA A:GLY48 4.1 65.1 1.0
C A:LYS52 4.2 64.5 1.0
N A:LYS52 4.3 66.6 1.0
C A:LYS47 4.3 63.0 1.0
CA A:CYS53 4.3 62.5 1.0
CD A:LYS68 4.3 62.1 1.0
CA A:LYS52 4.4 65.8 1.0
CA A:ALA51 4.6 68.3 1.0
C23 A:3FR313 4.6 50.4 1.0
CA A:LYS47 4.6 62.1 1.0
O A:GLY46 4.7 59.3 1.0
NZ A:LYS68 4.7 62.3 1.0
O A:LYS52 4.9 64.5 1.0
SG A:CYS53 4.9 62.8 1.0

Reference:

R.V.Fucini, E.J.Hanan, M.J.Romanowski, R.A.Elling, W.Lew, K.J.Barr, J.Zhu, J.C.Yoburn, Y.Liu, B.T.Fahr, J.Fan, Y.Lu, P.Pham, I.C.Choong, E.C.Vanderporten, M.Bui, H.E.Purkey, M.J.Evanchik, W.Yang. Design and Synthesis of 2-Amino-Pyrazolopyridines As Polo-Like Kinase 1 Inhibitors. Bioorg.Med.Chem.Lett. V. 18 5648 2008.
ISSN: ISSN 0960-894X
PubMed: 18793847
DOI: 10.1016/J.BMCL.2008.08.095
Page generated: Fri Jul 11 04:24:29 2025

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