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Chlorine in PDB 3dcx: Crystal Structure of A DUF1696 Family Protein with A Pleckstrin- Homology Domain (SHEW_0819) From Shewanella Loihica Pv-4 at 2.00 A Resolution

Protein crystallography data

The structure of Crystal Structure of A DUF1696 Family Protein with A Pleckstrin- Homology Domain (SHEW_0819) From Shewanella Loihica Pv-4 at 2.00 A Resolution, PDB code: 3dcx was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.070, 75.320, 139.400, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 22.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A DUF1696 Family Protein with A Pleckstrin- Homology Domain (SHEW_0819) From Shewanella Loihica Pv-4 at 2.00 A Resolution (pdb code 3dcx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A DUF1696 Family Protein with A Pleckstrin- Homology Domain (SHEW_0819) From Shewanella Loihica Pv-4 at 2.00 A Resolution, PDB code: 3dcx:

Chlorine binding site 1 out of 1 in 3dcx

Go back to Chlorine Binding Sites List in 3dcx
Chlorine binding site 1 out of 1 in the Crystal Structure of A DUF1696 Family Protein with A Pleckstrin- Homology Domain (SHEW_0819) From Shewanella Loihica Pv-4 at 2.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A DUF1696 Family Protein with A Pleckstrin- Homology Domain (SHEW_0819) From Shewanella Loihica Pv-4 at 2.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl125

b:56.8
occ:1.00
O B:HOH196 2.9 47.1 1.0
NE2 B:GLN98 3.5 33.3 1.0
CE1 C:HIS76 3.5 24.7 1.0
NE2 C:HIS76 4.2 22.8 1.0
CZ2 C:TRP94 4.5 29.1 1.0
NE1 C:TRP94 4.5 26.1 1.0
CB B:LEU102 4.5 29.9 1.0
CE2 C:TRP94 4.5 25.6 1.0
CD B:GLN98 4.5 34.9 1.0
CD1 B:LEU102 4.5 42.7 1.0
ND1 C:HIS76 4.5 25.2 1.0
CA B:LEU102 4.6 29.6 1.0
CE1 B:HIS67 4.6 44.6 1.0
N B:LEU102 4.7 25.5 1.0
OE1 B:GLN98 4.7 32.9 1.0
O C:HOH175 4.8 47.9 1.0
O B:PRO101 4.8 25.3 1.0
C B:PRO101 5.0 26.4 1.0

Reference:

Q.Xu, A.Bateman, R.D.Finn, P.Abdubek, T.Astakhova, H.L.Axelrod, C.Bakolitsa, D.Carlton, C.Chen, H.J.Chiu, M.Chiu, T.Clayton, D.Das, M.C.Deller, L.Duan, K.Ellrott, D.Ernst, C.L.Farr, J.Feuerhelm, J.C.Grant, A.Grzechnik, G.W.Han, L.Jaroszewski, K.K.Jin, H.E.Klock, M.W.Knuth, P.Kozbial, S.S.Krishna, A.Kumar, D.Marciano, D.Mcmullan, M.D.Miller, A.T.Morse, E.Nigoghossian, A.Nopakun, L.Okach, C.Puckett, R.Reyes, C.L.Rife, N.Sefcovic, H.J.Tien, C.B.Trame, H.Van Den Bedem, D.Weekes, T.Wooten, K.O.Hodgson, J.Wooley, M.A.Elsliger, A.M.Deacon, A.Godzik, S.A.Lesley, I.A.Wilson. Bacterial Pleckstrin Homology Domains: A Prokaryotic Origin For the pH Domain. J.Mol.Biol. V. 396 31 2010.
ISSN: ISSN 0022-2836
PubMed: 19913036
DOI: 10.1016/J.JMB.2009.11.006
Page generated: Fri Jul 11 04:26:27 2025

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