Atomistry » Chlorine » PDB 3dn8-3dyv » 3dyv
Atomistry »
  Chlorine »
    PDB 3dn8-3dyv »
      3dyv »

Chlorine in PDB 3dyv: Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism

Protein crystallography data

The structure of Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism, PDB code: 3dyv was solved by M.D.Bennett, M.-L.Delabre, R.Holland, G.E.Norris, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.40 / 1.81
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 47.154, 47.154, 174.226, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 22.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism (pdb code 3dyv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism, PDB code: 3dyv:

Chlorine binding site 1 out of 1 in 3dyv

Go back to Chlorine Binding Sites List in 3dyv
Chlorine binding site 1 out of 1 in the Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl245

b:34.1
occ:0.50
OG A:SER94 2.7 26.8 0.5
O A:HOH344 2.8 27.4 0.5
OG A:SER94 3.0 27.4 0.5
CB A:SER94 3.0 27.0 0.5
CB A:SER94 3.1 27.1 0.5
N A:TYR24 3.1 25.3 1.0
N A:LEU95 3.1 26.6 1.0
CB A:TYR24 3.3 26.3 1.0
CB A:LEU95 3.6 26.3 1.0
CA A:TYR24 3.8 25.9 1.0
CA A:LEU95 3.9 26.4 1.0
CB A:ALA23 3.9 24.2 1.0
C A:SER94 4.0 26.8 1.0
C A:ALA23 4.1 24.7 1.0
CA A:SER94 4.1 26.8 0.5
CA A:SER94 4.1 26.8 0.5
CA A:ALA23 4.1 24.4 1.0
O A:TYR24 4.2 26.0 1.0
C A:TYR24 4.5 25.8 1.0
CG A:TYR24 4.6 27.1 1.0
O A:LEU93 4.7 26.9 1.0
CD2 A:LEU127 4.8 39.9 1.0
NE2 A:HIS219 4.9 29.5 1.0

Reference:

M.D.Bennett, M.-L.Delabre, R.Holland, G.E.Norris. Snapshots of Esterase D From Lactobacillus Rhamnosus: Insights Into A Rotation Driven Catalytic Mechanism To Be Published.
Page generated: Sat Dec 12 09:39:22 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy