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Chlorine in PDB 3dzz: Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution, PDB code: 3dzz was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.78 / 1.61
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 115.800, 94.800, 84.602, 90.00, 127.13, 90.00
R / Rfree (%) 14.4 / 17.5

Other elements in 3dzz:

The structure of Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution (pdb code 3dzz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution, PDB code: 3dzz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3dzz

Go back to Chlorine Binding Sites List in 3dzz
Chlorine binding site 1 out of 2 in the Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl393

b:58.0
occ:1.00
NH2 A:ARG255 3.3 21.6 1.0
NH1 A:ARG255 3.7 21.7 1.0
O A:PHE104 3.8 17.3 1.0
O A:HOH693 3.8 56.1 1.0
CZ A:ARG255 4.0 18.4 1.0
CD1 A:PHE104 4.0 18.7 1.0
CA A:PHE104 4.1 14.2 1.0
O A:HOH512 4.2 29.4 1.0
CB A:PHE104 4.3 14.7 1.0
O4 A:PEG395 4.3 60.2 1.0
C A:PHE104 4.4 14.8 1.0
O A:HOH509 4.5 29.2 1.0
CG A:PHE104 4.6 13.1 1.0
CD1 A:LEU194 5.0 22.1 0.8
CE1 A:PHE104 5.0 21.5 1.0

Chlorine binding site 2 out of 2 in 3dzz

Go back to Chlorine Binding Sites List in 3dzz
Chlorine binding site 2 out of 2 in the Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Plp-Dependent Aminotransferase (LBUL_1103) From Lactobacillus Delbrueckii Subsp. at 1.61 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl391

b:60.3
occ:1.00
NH1 B:ARG255 3.5 20.7 1.0
NH2 B:ARG255 3.7 21.5 1.0
CD1 B:PHE104 3.9 16.6 1.0
CZ B:ARG255 4.0 19.4 1.0
O B:HOH482 4.0 26.7 1.0
CB B:PHE104 4.1 12.8 1.0
O B:PHE104 4.2 16.0 1.0
CA B:PHE104 4.2 14.7 1.0
CD1 B:LEU194 4.2 23.7 1.0
CG B:PHE104 4.3 13.4 1.0
CD1 B:LEU252 4.5 20.7 1.0
C B:PHE104 4.6 15.4 1.0
CG B:LEU194 4.7 21.1 1.0
CE1 B:PHE104 4.7 19.4 1.0
O B:HOH514 4.8 30.9 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 09:39:29 2020

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