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Chlorine in PDB 3e15: 6-Phosphogluconolactonase From Plasmodium Vivax

Enzymatic activity of 6-Phosphogluconolactonase From Plasmodium Vivax

All present enzymatic activity of 6-Phosphogluconolactonase From Plasmodium Vivax:
3.1.1.31;

Protein crystallography data

The structure of 6-Phosphogluconolactonase From Plasmodium Vivax, PDB code: 3e15 was solved by T.L.Arakaki, E.A.Merritt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.00
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 46.524, 80.846, 89.765, 63.98, 88.10, 80.01
R / Rfree (%) 15 / 20.2

Other elements in 3e15:

The structure of 6-Phosphogluconolactonase From Plasmodium Vivax also contains other interesting chemical elements:

Potassium (K) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 6-Phosphogluconolactonase From Plasmodium Vivax (pdb code 3e15). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 6-Phosphogluconolactonase From Plasmodium Vivax, PDB code: 3e15:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3e15

Go back to Chlorine Binding Sites List in 3e15
Chlorine binding site 1 out of 2 in the 6-Phosphogluconolactonase From Plasmodium Vivax


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 6-Phosphogluconolactonase From Plasmodium Vivax within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:9.7
occ:1.00
O A:HOH308 3.1 7.3 1.0
O B:HOH325 3.2 9.4 1.0
N A:ASN170 3.3 8.0 1.0
N B:ASN170 3.4 8.2 1.0
CB A:ASN170 3.8 7.8 1.0
CB B:ASN170 3.9 6.6 1.0
CB A:PHE173 3.9 8.4 1.0
CB B:PHE173 4.0 9.3 1.0
O A:ASN170 4.0 6.6 1.0
O A:PRO169 4.0 8.2 1.0
CA A:ASN170 4.1 6.7 1.0
O B:ASN170 4.1 9.1 1.0
O B:PRO169 4.1 8.5 1.0
C A:PRO169 4.1 8.5 1.0
CD2 A:PHE173 4.1 5.1 1.0
CA B:ASN170 4.2 7.3 1.0
C B:PRO169 4.2 8.9 1.0
CD2 B:PHE173 4.2 8.4 1.0
C A:ASN170 4.5 6.6 1.0
CG A:PHE173 4.5 6.5 1.0
N A:ASN174 4.6 7.2 1.0
C B:ASN170 4.6 8.6 1.0
CG B:PHE173 4.6 8.3 1.0
N B:ASN174 4.7 8.8 1.0
CB A:ASN174 4.8 5.8 1.0
CB B:ASN174 5.0 8.9 1.0

Chlorine binding site 2 out of 2 in 3e15

Go back to Chlorine Binding Sites List in 3e15
Chlorine binding site 2 out of 2 in the 6-Phosphogluconolactonase From Plasmodium Vivax


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 6-Phosphogluconolactonase From Plasmodium Vivax within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl305

b:9.0
occ:1.00
O D:HOH320 3.2 9.4 1.0
N D:ASN170 3.3 8.3 1.0
CB D:ASN170 3.8 7.2 1.0
CB D:PHE173 4.0 6.9 1.0
O D:ASN170 4.0 8.0 1.0
O D:PRO169 4.0 7.8 1.0
CA D:ASN170 4.1 7.8 1.0
C D:PRO169 4.1 8.4 1.0
CD2 D:PHE173 4.2 9.3 1.0
C D:ASN170 4.5 7.7 1.0
CG D:PHE173 4.6 7.8 1.0
N D:ASN174 4.6 7.1 1.0
CB D:ASN174 4.8 5.7 1.0

Reference:

T.L.Arakaki, E.A.Merritt. 6-Phosphogluconolactonase From Plasmodium Vivax To Be Published.
Page generated: Sat Jul 20 18:36:21 2024

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