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Chlorine in PDB 3e9l: Crystal Structure of Human PRP8, Residues 1755-2016

Protein crystallography data

The structure of Crystal Structure of Human PRP8, Residues 1755-2016, PDB code: 3e9l was solved by V.Pena, A.Rozov, M.C.Wahl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.95
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 83.426, 83.426, 96.263, 90.00, 90.00, 120.00
R / Rfree (%) 20.5 / 24.8

Other elements in 3e9l:

The structure of Crystal Structure of Human PRP8, Residues 1755-2016 also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human PRP8, Residues 1755-2016 (pdb code 3e9l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human PRP8, Residues 1755-2016, PDB code: 3e9l:

Chlorine binding site 1 out of 1 in 3e9l

Go back to Chlorine Binding Sites List in 3e9l
Chlorine binding site 1 out of 1 in the Crystal Structure of Human PRP8, Residues 1755-2016


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human PRP8, Residues 1755-2016 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2018

b:38.2
occ:1.00
O A:HOH2056 2.9 14.4 0.5
O A:HOH2055 3.1 21.3 0.5
N A:SER1929 3.2 32.7 1.0
OG A:SER1929 3.6 30.6 1.0
CB A:SER1928 3.8 32.6 1.0
CB A:SER1929 3.8 32.1 1.0
CA A:SER1928 3.9 33.2 1.0
C A:SER1928 4.0 32.9 1.0
CA A:SER1929 4.1 32.3 1.0
NH2 A:ARG1813 4.3 30.7 1.0
NE A:ARG1813 4.6 32.1 1.0
CZ A:ARG1813 4.8 32.9 1.0
N A:TYR1930 4.8 32.7 1.0
OG A:SER1928 4.9 32.5 1.0

Reference:

V.Pena, A.Rozov, P.Fabrizio, R.Luhrmann, M.C.Wahl. Structure and Function of An Rnase H Domain at the Heart of the Spliceosome. Embo J. V. 27 2929 2008.
ISSN: ISSN 0261-4189
PubMed: 18843295
DOI: 10.1038/EMBOJ.2008.209
Page generated: Sat Dec 12 09:39:51 2020

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