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Chlorine in PDB 3epf: Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2 (pdb code 3epf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2, PDB code: 3epf:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3epf

Go back to Chlorine Binding Sites List in 3epf
Chlorine binding site 1 out of 3 in the Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
1:Cl999

b:5.3
occ:1.00
CL1 1:SC4999 0.0 5.3 1.0
C4 1:SC4999 1.8 5.0 1.0
C5 1:SC4999 2.8 5.4 1.0
C3 1:SC4999 2.8 6.4 1.0
O1 1:SC4999 3.1 7.5 1.0
C6 1:SC4999 4.1 5.2 1.0
C2 1:SC4999 4.1 5.2 1.0
O 1:THR111 4.2 13.0 1.0
CZ 1:PHE134 4.2 8.0 1.0
C 1:THR111 4.2 11.7 1.0
CG2 1:ILE110 4.3 8.0 1.0
SD 1:MET132 4.3 12.2 1.0
CB 1:TYR112 4.3 10.9 1.0
N 1:TYR112 4.4 11.2 1.0
C7 1:SC4999 4.5 6.8 1.0
C13 1:SC4999 4.5 9.6 1.0
CE2 1:PHE134 4.6 8.2 1.0
C1 1:SC4999 4.6 5.1 1.0
SD 1:MET261 4.7 19.8 1.0
CA 1:TYR112 4.7 11.6 1.0
CG 1:MET261 4.7 16.4 1.0
CA 1:THR111 4.8 11.5 1.0
N 1:THR111 4.9 10.8 1.0

Chlorine binding site 2 out of 3 in 3epf

Go back to Chlorine Binding Sites List in 3epf
Chlorine binding site 2 out of 3 in the Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
1:Cl999

b:5.3
occ:1.00
CL2 1:SC4999 0.0 5.3 1.0
C16 1:SC4999 1.8 5.2 1.0
C17 1:SC4999 2.7 5.2 1.0
C15 1:SC4999 2.8 5.6 1.0
O2 1:SC4999 3.1 5.7 1.0
C14 1:SC4999 3.3 7.6 1.0
CD2 1:TYR159 3.6 8.1 1.0
CG 1:TYR159 4.0 9.1 1.0
C18 1:SC4999 4.1 5.2 1.0
CG 1:PRO181 4.1 9.9 1.0
C20 1:SC4999 4.1 5.1 1.0
CE2 1:TYR159 4.2 6.7 1.0
CB 1:TYR159 4.2 8.2 1.0
CB 1:PRO181 4.3 9.1 1.0
CG2 1:VAL196 4.4 10.1 1.0
C11 1:SC4999 4.6 7.8 1.0
C19 1:SC4999 4.6 5.1 1.0
CD1 1:TYR159 4.9 8.3 1.0
CG1 1:VAL196 4.9 10.6 1.0
CD 1:PRO181 4.9 10.3 1.0

Chlorine binding site 3 out of 3 in 3epf

Go back to Chlorine Binding Sites List in 3epf
Chlorine binding site 3 out of 3 in the Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cryoem Structure of Poliovirus Receptor Bound to Poliovirus Type 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
1:Cl999

b:5.5
occ:1.00
CL3 1:SC4999 0.0 5.5 1.0
C20 1:SC4999 1.8 5.1 1.0
C19 1:SC4999 2.7 5.1 1.0
C15 1:SC4999 2.8 5.6 1.0
O2 1:SC4999 3.1 5.7 1.0
CG 1:PHE134 3.8 8.8 1.0
CD2 1:LEU240 3.8 7.0 1.0
CD2 1:PHE134 3.8 8.5 1.0
C14 1:SC4999 3.9 7.6 1.0
CD1 1:PHE134 3.9 8.6 1.0
CZ 1:PHE136 4.0 9.5 1.0
C12 1:SC4999 4.0 10.0 1.0
CD1 1:LEU240 4.0 6.4 1.0
CE2 1:PHE134 4.1 8.2 1.0
C18 1:SC4999 4.1 5.2 1.0
C16 1:SC4999 4.1 5.2 1.0
CE1 1:PHE134 4.2 9.2 1.0
CZ 1:PHE134 4.2 8.0 1.0
CB 1:PHE134 4.3 6.8 1.0
CG 1:LEU240 4.4 7.8 1.0
CE2 1:PHE136 4.4 10.1 1.0
C11 1:SC4999 4.5 7.8 1.0
CD1 1:ILE194 4.5 5.1 1.0
C17 1:SC4999 4.6 5.2 1.0

Reference:

P.Zhang, S.Mueller, M.C.Morais, C.M.Bator, V.D.Bowman, S.Hafenstein, E.Wimmer, M.G.Rossmann. Crystal Structure of CD155 and Electron Microscopic Studies of Its Complexes with Polioviruses. Proc.Natl.Acad.Sci.Usa V. 105 18284 2008.
ISSN: ISSN 0027-8424
PubMed: 19011098
DOI: 10.1073/PNAS.0807848105
Page generated: Sat Dec 12 09:40:28 2020

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