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Chlorine in PDB 3ew5: Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov

Protein crystallography data

The structure of Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov, PDB code: 3ew5 was solved by J.A.Wojdyla, I.Manolaridis, P.A.Tucker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.66 / 3.10
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 161.130, 161.130, 98.290, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov (pdb code 3ew5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov, PDB code: 3ew5:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 3ew5

Go back to Chlorine Binding Sites List in 3ew5
Chlorine binding site 1 out of 4 in the Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl4

b:92.1
occ:1.00
N A:GLY77 3.4 58.6 1.0
CA A:GLY77 3.8 57.4 1.0
C A:GLY76 4.5 59.6 1.0
CA A:GLY76 4.8 60.1 1.0
C A:GLY77 4.8 57.1 1.0
OH A:TYR187 4.9 66.6 1.0
O A:GLY77 4.9 56.9 1.0

Chlorine binding site 2 out of 4 in 3ew5

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Chlorine binding site 2 out of 4 in the Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl5

b:73.2
occ:1.00
N B:GLY77 3.5 58.1 1.0
CA B:GLY77 4.1 57.2 1.0
C B:GLY76 4.5 58.7 1.0
CA B:GLY76 4.6 59.2 1.0

Chlorine binding site 3 out of 4 in 3ew5

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Chlorine binding site 3 out of 4 in the Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl7

b:74.4
occ:1.00
N B:ARG133 3.3 74.6 1.0
CA B:SER132 4.0 74.1 1.0
C B:SER132 4.1 74.2 1.0
CA B:ARG133 4.2 75.2 1.0
CB B:SER132 4.2 74.2 1.0

Chlorine binding site 4 out of 4 in 3ew5

Go back to Chlorine Binding Sites List in 3ew5
Chlorine binding site 4 out of 4 in the Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of the Tetragonal Crystal Form of X (Adrp) Domain From Fcov within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl6

b:69.7
occ:1.00
N C:ARG133 3.4 74.0 1.0
CA C:ARG133 4.1 74.1 1.0
O C:HOH221 4.4 46.7 1.0
C C:SER132 4.4 73.7 1.0
CA C:SER132 4.4 73.5 1.0
CB C:SER132 4.8 73.4 1.0

Reference:

J.A.Wojdyla, I.Manolaridis, E.J.Snijder, A.E.Gorbalenya, B.Coutard, Y.Piotrowski, R.Hilgenfeld, P.A.Tucker. Structure of the X (Adrp) Domain of NSP3 From Feline Coronavirus Acta Crystallogr.,Sect.D V. 65 1292 2009.
ISSN: ISSN 0907-4449
PubMed: 19966415
DOI: 10.1107/S0907444909040074
Page generated: Sat Dec 12 09:40:50 2020

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