Atomistry » Chlorine » PDB 3f68-3fed » 3faj
Atomistry »
  Chlorine »
    PDB 3f68-3fed »
      3faj »

Chlorine in PDB 3faj: Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv)

Protein crystallography data

The structure of Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv), PDB code: 3faj was solved by A.Goulet, G.Vestergaard, U.Scheele, V.Campanacci, R.A.Garrett, C.Cambillau, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.99 / 1.70
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 62.450, 62.450, 57.220, 90.00, 90.00, 120.00
R / Rfree (%) 17.4 / 19.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv) (pdb code 3faj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv), PDB code: 3faj:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3faj

Go back to Chlorine Binding Sites List in 3faj
Chlorine binding site 1 out of 3 in the Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl132

b:16.9
occ:1.00
OG1 A:THR51 3.0 22.8 1.0
NE A:ARG110 3.1 32.0 1.0
N A:THR51 3.3 23.3 1.0
NH2 A:ARG110 3.4 29.7 1.0
C A:ASP48 3.7 23.8 1.0
OD1 A:ASN111 3.7 27.4 1.0
CB A:THR51 3.7 23.3 1.0
CB A:ASP48 3.7 23.6 1.0
CZ A:ARG110 3.7 32.9 1.0
CA A:ASP48 3.7 23.7 1.0
N A:ARG50 3.8 23.5 1.0
O A:HOH257 3.8 22.7 1.0
CB A:ARG50 3.9 23.4 0.5
O A:ASP48 4.0 23.6 1.0
CB A:ARG50 4.0 23.2 0.5
N A:GLU49 4.1 24.1 1.0
CA A:THR51 4.1 23.5 1.0
CA A:ARG50 4.1 23.5 0.5
CA A:ARG50 4.2 23.3 0.5
C A:ARG50 4.2 23.3 1.0
CD A:ARG110 4.2 30.1 1.0
CG A:ARG110 4.4 27.6 1.0
CG A:ASP48 4.6 25.8 1.0
O A:HOH192 4.6 39.5 1.0
OD1 A:ASP48 4.6 27.0 1.0
C A:GLU49 4.7 23.6 1.0
CG2 A:THR107 4.7 22.7 1.0
CG A:ASN111 4.7 24.1 1.0
CG A:ARG50 4.7 24.6 0.5
CB A:ARG110 4.8 25.6 1.0
NH1 A:ARG110 5.0 33.4 1.0

Chlorine binding site 2 out of 3 in 3faj

Go back to Chlorine Binding Sites List in 3faj
Chlorine binding site 2 out of 3 in the Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl133

b:28.7
occ:1.00
O A:HOH184 3.1 20.6 1.0
ND2 A:ASN92 3.2 30.1 1.0
NE2 A:GLN88 3.6 32.8 0.8
CG A:GLN88 3.6 27.7 0.8
O A:GLN88 3.9 24.6 1.0
CB A:ASN92 3.9 23.8 1.0
CA A:VAL89 3.9 24.9 1.0
CG A:ASN92 4.1 28.0 1.0
C A:GLN88 4.1 24.6 1.0
CD A:GLN88 4.1 32.0 0.8
N A:VAL89 4.1 24.3 1.0
CG2 A:VAL89 4.2 24.6 1.0
O A:HOH202 4.5 27.7 1.0
CB A:VAL89 4.6 24.8 1.0
CB A:GLN88 4.7 24.4 0.8
O A:MET61 4.7 25.2 1.0
CB A:MET61 4.8 26.5 1.0
O A:HOH205 4.8 32.1 1.0
O A:HOH191 4.8 32.4 1.0
CB A:ALA65 4.8 25.3 1.0
O A:VAL89 4.9 25.0 1.0
O A:HOH256 4.9 38.6 1.0
C A:VAL89 4.9 25.4 1.0
CA A:GLN88 5.0 24.4 1.0

Chlorine binding site 3 out of 3 in 3faj

Go back to Chlorine Binding Sites List in 3faj
Chlorine binding site 3 out of 3 in the Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl134

b:33.2
occ:1.00
O A:HOH250 2.8 34.8 1.0
NZ A:LYS52 3.4 30.9 1.0
CA A:GLU49 3.6 24.1 1.0
CB A:GLU49 3.6 24.8 1.0
CG A:GLU49 3.8 25.8 1.0
CE A:LYS52 3.9 27.7 1.0
CD A:LYS52 4.0 24.9 1.0
O A:ARG44 4.0 25.1 1.0
N A:GLU49 4.1 24.1 1.0
CA A:ARG44 4.1 24.9 0.5
CA A:ARG44 4.1 24.8 0.5
CA A:GLY47 4.2 24.2 1.0
C A:GLY47 4.3 24.3 1.0
CG A:ARG44 4.4 25.4 0.5
CD A:GLU49 4.5 26.4 1.0
C A:ARG44 4.6 24.8 1.0
C A:ASP48 4.6 23.8 1.0
CG A:ARG44 4.6 25.0 0.5
O A:GLY47 4.7 24.2 1.0
N A:ASP48 4.7 22.9 1.0
OE1 A:GLU49 4.7 29.7 1.0
CB A:ARG44 4.8 24.7 0.5
CB A:ARG44 4.8 24.7 0.5
O A:ALA43 4.8 23.7 1.0
C A:GLU49 4.8 23.6 1.0
N A:GLY47 4.9 24.4 1.0
O A:ASP48 4.9 23.6 1.0
CB A:LYS52 4.9 23.5 1.0
O A:HOH139 5.0 20.9 1.0

Reference:

A.Goulet, G.Vestergaard, U.Scheele, V.Campanacci, R.A.Garrett, C.Cambillau. Structure of the Structural Protein P131 of the Archaeal Virus Acidianus Two-Tailed Virus (Atv) To Be Published.
Page generated: Sat Jul 20 19:15:40 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy