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Chlorine in PDB 3fpi: Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate

Enzymatic activity of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate

All present enzymatic activity of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate:
4.6.1.12;

Protein crystallography data

The structure of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate, PDB code: 3fpi was solved by Y.Kim, N.Maltseva, J.Stam, W.F.Anderson, A.Joachimiak, Centerfor Structural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.33 / 2.80
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 145.639, 145.639, 145.639, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 19.9

Other elements in 3fpi:

The structure of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate (pdb code 3fpi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate, PDB code: 3fpi:

Chlorine binding site 1 out of 1 in 3fpi

Go back to Chlorine Binding Sites List in 3fpi
Chlorine binding site 1 out of 1 in the Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl165

b:30.0
occ:0.33
MG A:MG168 3.1 51.1 0.3
NH1 A:ARG144 3.2 64.7 1.0
CA A:GLY140 4.0 58.7 1.0
O A:HOH244 4.3 71.3 0.3
N A:PHE141 4.4 58.3 1.0
CZ A:ARG144 4.5 65.0 1.0
C A:GLY140 4.5 58.8 1.0

Reference:

Y.Kim, N.Maltseva, J.Stam, W.F.Anderson, A.Joachimiak. Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase Ispf Complexed with Cytidine Triphosphate To Be Published.
Page generated: Sat Jul 20 19:32:51 2024

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