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Chlorine in PDB 3fvj: Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate

Enzymatic activity of Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate

All present enzymatic activity of Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate:
3.1.1.4;

Protein crystallography data

The structure of Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate, PDB code: 3fvj was solved by Y.H.Pan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.87 / 2.30
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 69.064, 69.064, 68.840, 90.00, 90.00, 120.00
R / Rfree (%) 20.1 / 24.9

Other elements in 3fvj:

The structure of Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate (pdb code 3fvj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate, PDB code: 3fvj:

Chlorine binding site 1 out of 1 in 3fvj

Go back to Chlorine Binding Sites List in 3fvj
Chlorine binding site 1 out of 1 in the Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Phospholipase A2 1B Crystallized in the Presence of Octyl Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl127

b:69.2
occ:1.00
CG A:ARG6 4.0 51.3 1.0
CD A:ARG6 4.4 55.8 1.0
O A:PRO18 4.5 54.9 1.0
C A:PRO18 4.7 56.6 1.0
CD1 A:LEU2 4.7 34.2 1.0
CE2 A:PHE5 4.7 36.3 1.0
CD2 A:PHE5 4.7 36.8 1.0
CD2 A:LEU19 4.8 60.0 1.0
CD1 A:ILE9 4.8 42.2 1.0
CA A:LEU19 4.8 57.7 1.0
N A:LEU19 4.8 57.0 1.0
CB A:ASN23 5.0 55.8 1.0
ND2 A:ASN23 5.0 59.3 1.0

Reference:

Y.H.Pan, B.J.Bahnson. Structure of A Premicellar Complex of Alkyl Sulfates with the Interfacial Binding Surfaces of Four Subunits of Phospholipase A2. Biochim.Biophys.Acta V.1804 1443 2010.
ISSN: ISSN 0006-3002
PubMed: 20302975
DOI: 10.1016/J.BBAPAP.2010.03.004
Page generated: Sat Dec 12 09:42:37 2020

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