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Chlorine in PDB 3fzl: Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors

Protein crystallography data

The structure of Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors, PDB code: 3fzl was solved by P.Dokurno, D.S.Williamson, J.B.Murray, A.E.Surgenor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.92 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 40.601, 120.384, 53.128, 90.00, 106.57, 90.00
R / Rfree (%) 21 / 30.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors (pdb code 3fzl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors, PDB code: 3fzl:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3fzl

Go back to Chlorine Binding Sites List in 3fzl
Chlorine binding site 1 out of 3 in the Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:53.4
occ:1.00
CL20 A:3FD401 0.0 53.4 1.0
C16 A:3FD401 1.7 52.1 1.0
C15 A:3FD401 2.7 51.6 0.5
C17 A:3FD401 2.7 51.6 0.5
C15 A:3FD401 2.7 51.9 0.5
C17 A:3FD401 2.7 51.9 0.5
CL21 A:3FD401 3.1 50.8 0.5
CL21 A:3FD401 3.1 50.7 0.5
C14 A:3FD401 4.0 51.7 0.5
C18 A:3FD401 4.0 51.7 0.5
C14 A:3FD401 4.0 51.1 0.5
C18 A:3FD401 4.0 51.1 0.5
NH1 A:ARG272 4.0 36.5 1.0
CZ A:ARG272 4.1 37.7 1.0
NH2 A:ARG272 4.2 37.5 1.0
N38 A:3FD401 4.3 50.1 1.0
C37 A:3FD401 4.4 51.3 1.0
C13 A:3FD401 4.5 50.8 1.0
NE A:ARG272 4.5 37.3 1.0
C34 A:3FD401 4.9 50.5 1.0
C35 A:3FD401 4.9 49.8 1.0

Chlorine binding site 2 out of 3 in 3fzl

Go back to Chlorine Binding Sites List in 3fzl
Chlorine binding site 2 out of 3 in the Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:50.8
occ:0.50
CL21 A:3FD401 0.0 50.8 0.5
C15 A:3FD401 1.7 51.6 0.5
C17 A:3FD401 1.7 51.6 0.5
C16 A:3FD401 2.7 52.1 1.0
C14 A:3FD401 2.7 51.7 0.5
C18 A:3FD401 2.7 51.7 0.5
CL20 A:3FD401 3.1 53.4 1.0
C35 A:3FD401 3.3 49.8 1.0
NE A:ARG272 3.6 37.3 1.0
C36 A:3FD401 3.8 50.3 1.0
OE1 A:GLU268 3.9 40.6 1.0
CZ A:ARG272 3.9 37.7 1.0
C15 A:3FD401 4.0 51.9 0.5
C17 A:3FD401 4.0 51.9 0.5
C13 A:3FD401 4.0 50.8 1.0
NH2 A:ARG272 4.1 37.5 1.0
C34 A:3FD401 4.2 50.5 1.0
CD A:ARG272 4.2 37.2 1.0
OE2 A:GLU268 4.2 41.7 1.0
CD A:GLU268 4.4 38.6 1.0
C37 A:3FD401 4.5 51.3 1.0
C14 A:3FD401 4.5 51.1 0.5
C18 A:3FD401 4.5 51.1 0.5
NH1 A:ARG272 4.8 36.5 1.0
C31 A:3FD401 5.0 50.3 1.0

Chlorine binding site 3 out of 3 in 3fzl

Go back to Chlorine Binding Sites List in 3fzl
Chlorine binding site 3 out of 3 in the Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structures of HSC70/BAG1 in Complex with Small Molecule Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:50.7
occ:0.50
CL21 A:3FD401 0.0 50.7 0.5
C15 A:3FD401 1.7 51.9 0.5
C17 A:3FD401 1.7 51.9 0.5
C16 A:3FD401 2.7 52.1 1.0
C14 A:3FD401 2.7 51.1 0.5
C18 A:3FD401 2.7 51.1 0.5
CL20 A:3FD401 3.1 53.4 1.0
O A:HOH442 3.9 42.2 1.0
C15 A:3FD401 4.0 51.6 0.5
C17 A:3FD401 4.0 51.6 0.5
C13 A:3FD401 4.0 50.8 1.0
O A:HOH532 4.1 38.9 1.0
C14 A:3FD401 4.5 51.7 0.5
C18 A:3FD401 4.5 51.7 0.5

Reference:

D.S.Williamson, J.Borgognoni, A.Clay, Z.Daniels, P.Dokurno, M.J.Drysdale, N.Foloppe, G.L.Francis, C.J.Graham, R.Howes, A.T.Macias, J.B.Murray, R.Parsons, T.Shaw, A.E.Surgenor, L.Terry, Y.Wang, M.Wood, A.J.Massey. Novel Adenosine-Derived Inhibitors of 70 kDa Heat Shock Protein, Discovered Through Structure-Based Design J.Med.Chem. V. 52 1510 2009.
ISSN: ISSN 0022-2623
PubMed: 19256508
DOI: 10.1021/JM801627A
Page generated: Sat Jul 20 19:47:01 2024

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