Atomistry » Chlorine » PDB 3gjx-3gwu » 3gl1
Atomistry »
  Chlorine »
    PDB 3gjx-3gwu »
      3gl1 »

Chlorine in PDB 3gl1: Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae

Protein crystallography data

The structure of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae, PDB code: 3gl1 was solved by J.Osipiuk, H.Li, M.Bargassa, C.Sahi, E.A.Craig, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.70 / 1.92
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 76.543, 54.504, 90.623, 90.00, 104.36, 90.00
R / Rfree (%) 16.4 / 21.8

Other elements in 3gl1:

The structure of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae (pdb code 3gl1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae, PDB code: 3gl1:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 1 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl707

b:25.8
occ:1.00
 OG1 A:THR17 2.9 17.7 0.4
N A:THR17 3.2 14.3 1.0
O A:HOH602 3.2 13.7 1.0
O A:HOH546 3.3 23.6 1.0
N A:TYR18 3.4 13.8 1.0
N A:THR16 3.6 13.9 1.0
O A:TYR18 3.8 15.9 1.0
CB A:THR17 3.9 14.3 0.6
CA A:THR17 3.9 14.4 0.6
CA A:THR17 3.9 14.8 0.4
O A:HOH604 3.9 29.5 1.0
CB A:THR17 3.9 14.8 0.4
CL A:CL710 4.1 36.1 1.0
C A:THR17 4.1 14.3 1.0
C A:GLY15 4.1 13.6 1.0
CA A:GLY15 4.1 13.7 1.0
C A:THR16 4.2 14.7 1.0
CA A:THR16 4.3 14.5 1.0
OG1 A:THR17 4.3 14.0 0.6
CA A:TYR18 4.3 14.1 1.0
O A:HOH632 4.3 15.9 1.0
O A:HOH548 4.4 12.9 1.0
CB A:THR16 4.4 15.6 1.0
CB A:TYR18 4.5 13.5 1.0
CG2 A:THR17 4.5 14.9 0.4
C A:TYR18 4.5 14.1 1.0
CD2 A:TYR18 4.9 19.1 1.0
O A:HOH440 4.9 14.7 1.0
MG A:MG701 4.9 20.4 1.0
O A:GLY15 5.0 14.0 1.0
OG1 A:THR16 5.0 12.1 1.0

Chlorine binding site 2 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 2 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl708

b:19.8
occ:1.00
 O B:HOH439 3.1 14.2 1.0
N A:ASP288 3.2 14.1 1.0
O A:HOH393 3.2 11.4 1.0
O B:HOH659 3.2 19.7 1.0
NH2 A:ARG265 3.5 9.0 1.0
CB A:ASP288 3.8 15.2 1.0
CA A:VAL287 3.9 14.5 1.0
C A:VAL287 4.0 15.4 1.0
CA A:ASP288 4.1 14.9 1.0
O B:HOH398 4.3 23.6 1.0
CG1 A:VAL287 4.4 12.9 1.0
O A:GLU286 4.4 15.6 1.0
CD B:ARG345 4.4 18.2 1.0
O A:HOH519 4.5 22.5 1.0
O A:ASP288 4.6 14.3 1.0
O B:SER278 4.6 16.3 1.0
O B:HOH474 4.7 8.7 1.0
CB A:VAL287 4.7 14.1 1.0
CZ A:ARG265 4.7 12.7 1.0
N A:VAL287 4.8 15.9 1.0
CB B:SER278 4.9 14.4 1.0
O B:HOH545 4.9 18.6 1.0
C A:ASP288 4.9 14.6 1.0
C A:GLU286 4.9 15.7 1.0
CB B:ARG345 4.9 15.2 1.0
CG B:ARG345 5.0 16.4 1.0
NE B:ARG345 5.0 15.7 1.0

Chlorine binding site 3 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 3 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl710

b:36.1
occ:1.00
 O A:HOH548 2.9 12.9 1.0
OG1 A:THR16 3.0 12.1 1.0
NZ A:LYS73 3.0 20.4 1.0
N A:THR16 3.4 13.9 1.0
O A:HOH440 3.6 14.7 1.0
CB A:THR16 3.8 15.6 1.0
CE A:LYS73 4.0 19.4 1.0
O A:HOH675 4.0 36.8 1.0
CA A:GLY15 4.1 13.7 1.0
CL A:CL707 4.1 25.8 1.0
CA A:THR16 4.2 14.5 1.0
OG1 A:THR207 4.2 22.6 1.0
C A:GLY15 4.2 13.6 1.0
CD A:LYS73 4.3 16.4 1.0
OE1 A:GLU177 4.3 18.6 1.0
CG2 A:THR207 4.3 24.7 1.0
MG A:MG701 4.4 20.4 1.0
O A:HOH602 4.5 13.7 1.0
OE2 A:GLU177 4.5 20.4 1.0
O A:HOH546 4.7 23.6 1.0
CB A:THR207 4.8 22.9 1.0
CD A:GLU177 4.8 19.5 1.0

Chlorine binding site 4 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 4 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl711

b:33.1
occ:1.00
 NH2 B:ARG345 3.2 15.6 1.0
ND2 B:ASN367 3.3 16.3 1.0
NE A:ARG261 3.3 26.6 0.6
CZ A:ARG261 3.5 25.9 0.6
CD A:ARG265 3.6 12.4 1.0
CD A:ARG261 3.7 24.1 0.4
NE A:ARG265 3.7 13.6 1.0
NH1 B:ARG345 3.7 16.3 1.0
NH2 A:ARG261 3.7 25.3 0.6
CZ A:ARG265 3.8 12.7 1.0
NH1 A:ARG265 3.8 15.1 1.0
CD A:ARG261 3.9 24.8 0.6
CZ B:ARG345 3.9 16.3 1.0
NH1 A:ARG261 4.1 25.9 0.6
CB B:ASN367 4.1 14.3 1.0
CG B:ASN367 4.2 15.3 1.0
NE A:ARG261 4.5 25.2 0.4
CG A:ARG261 4.5 22.5 0.4
O A:HOH469 4.5 18.6 1.0
CG A:ARG261 4.5 22.9 0.6
NH2 A:ARG265 4.5 9.0 1.0
O A:HOH606 4.6 15.6 1.0
NH1 A:ARG261 4.7 25.4 0.4
O B:HOH471 4.8 15.8 1.0
CG A:ARG265 4.8 13.6 1.0
CA B:ASN367 4.8 13.9 1.0
CZ A:ARG261 4.9 25.1 0.4

Chlorine binding site 5 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 5 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl704

b:20.6
occ:1.00
 OG1 B:THR16 2.9 10.3 1.0
O B:HOH540 3.1 14.0 1.0
NZ B:LYS73 3.1 12.8 1.0
N B:THR16 3.3 12.5 1.0
OG1 B:THR207 3.5 17.1 1.0
O B:HOH642 3.6 16.9 1.0
CB B:THR16 3.6 11.8 1.0
O B:HOH438 3.7 14.2 1.0
O B:HOH426 3.8 9.4 1.0
CE B:LYS73 3.9 15.5 1.0
CA B:THR16 4.0 11.8 1.0
CD B:LYS73 4.1 14.3 1.0
CA B:GLY15 4.1 12.3 1.0
C B:GLY15 4.2 12.3 1.0
CG2 B:THR207 4.3 12.4 1.0
C3 B:GOL712 4.3 18.4 1.0
OE1 B:GLU177 4.3 16.8 1.0
CL B:CL705 4.4 20.6 1.0
MG B:MG702 4.5 15.8 1.0
CB B:THR207 4.5 16.6 1.0
O B:HOH478 4.5 17.5 1.0
O B:HOH655 4.6 14.6 1.0
OE2 B:GLU177 4.7 15.9 1.0
CD B:GLU177 4.9 14.4 1.0
O3 B:GOL712 4.9 22.6 1.0
CG B:PRO149 5.0 15.3 1.0

Chlorine binding site 6 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 6 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl705

b:20.6
occ:1.00
 O B:HOH438 3.0 14.2 1.0
OG1 B:THR17 3.1 17.5 1.0
O B:HOH616 3.1 32.9 1.0
N B:THR17 3.1 12.0 1.0
O B:HOH655 3.2 14.6 1.0
N B:TYR18 3.5 12.8 1.0
N B:THR16 3.6 12.5 1.0
CA B:THR17 3.8 12.9 1.0
CB B:THR17 3.9 13.7 1.0
N B:GLY205 3.9 15.1 1.0
O B:TYR18 4.1 15.0 1.0
C B:GLY15 4.1 12.3 1.0
O B:HOH540 4.1 14.0 1.0
C B:THR16 4.1 12.2 1.0
C B:THR17 4.2 13.8 1.0
CA B:THR16 4.2 11.8 1.0
CA B:GLY15 4.2 12.3 1.0
CG2 B:THR17 4.3 12.7 1.0
O B:HOH472 4.3 19.2 1.0
CB B:THR16 4.3 11.8 1.0
CL B:CL704 4.4 20.6 1.0
CA B:TYR18 4.5 14.6 1.0
CA B:GLY205 4.6 14.8 1.0
CB B:TYR18 4.7 15.2 1.0
MG B:MG702 4.7 15.8 1.0
CA B:GLY204 4.8 14.9 1.0
C B:TYR18 4.8 15.2 1.0
C B:GLY204 4.8 13.9 1.0
N B:GLY206 4.8 13.6 1.0
O B:HOH604 4.9 20.9 1.0
O B:HOH426 4.9 9.4 1.0
O B:GLY15 5.0 13.5 1.0

Chlorine binding site 7 out of 7 in 3gl1

Go back to Chlorine Binding Sites List in 3gl1
Chlorine binding site 7 out of 7 in the Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Atpase Domain of SSB1 Chaperone, A Member of the HSP70 Family, From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl709

b:30.7
occ:1.00
 O B:HOH461 2.9 17.2 1.0
O B:HOH396 3.1 37.6 1.0
N B:ASN176 3.2 15.3 1.0
CB B:ILE175 3.6 17.9 1.0
CA B:ILE175 3.6 18.4 1.0
ND2 B:ASN176 3.8 13.2 1.0
C B:ILE175 3.9 17.2 1.0
CG B:ASN176 4.0 15.9 1.0
CG2 B:ILE175 4.0 18.9 1.0
CG2 B:THR179 4.1 18.5 1.0
CB B:ASN176 4.1 14.7 1.0
CB B:THR179 4.2 17.9 1.0
OG1 B:THR179 4.2 17.6 1.0
CA B:ASN176 4.3 14.7 1.0
O B:ILE174 4.6 20.6 1.0
OD1 B:ASN176 4.7 15.8 1.0
CG1 B:ILE175 4.8 21.0 1.0
N B:ILE175 4.9 17.5 1.0

Reference:

J.Osipiuk, H.Li, M.Bargassa, C.Sahi, E.A.Craig, A.Joachimiak. Crystal Structure of Atpase Domain of SSB1 Chaperone, Member of the HSP70 Family From Saccharomyces Cerevisiae. To Be Published.
Page generated: Sat Jul 20 20:22:07 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy