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Chlorine in PDB 3hhl: Crystal Structure of Methylated RPA0582 Protein

Protein crystallography data

The structure of Crystal Structure of Methylated RPA0582 Protein, PDB code: 3hhl was solved by P.Sledz, E.Niedzialkowska, M.Chruszcz, P.Porebski, V.Yim, M.Kudritska, M.D.Zimmerman, E.Evdokimova, A.Savchenko, A.Edwards, A.Joachimiak, W.Minor, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.17 / 2.65
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 193.012, 193.012, 117.965, 90.00, 90.00, 120.00
R / Rfree (%) 17.8 / 20.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Methylated RPA0582 Protein (pdb code 3hhl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Methylated RPA0582 Protein, PDB code: 3hhl:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 3hhl

Go back to Chlorine Binding Sites List in 3hhl
Chlorine binding site 1 out of 4 in the Crystal Structure of Methylated RPA0582 Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Methylated RPA0582 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl145

b:54.6
occ:1.00
OH A:TYR94 3.2 49.1 1.0
O19 A:2PE148 3.2 0.3 1.0
ND2 A:ASN28 3.2 34.9 1.0
C18 A:2PE148 3.4 0.3 1.0
C17 A:2PE148 3.5 0.7 1.0
CB A:MSE26 3.7 32.5 1.0
C20 A:2PE148 3.7 0.3 1.0
CE1 A:TYR94 3.7 39.4 1.0
CB A:ALA92 3.7 31.4 1.0
CZ A:TYR94 3.9 41.8 1.0
CG A:ASN28 4.1 34.1 1.0
OD1 A:ASN28 4.1 36.1 1.0
CD1 A:LEU125 4.1 34.6 1.0
CE1 A:PHE100 4.1 34.3 1.0
CG A:MSE26 4.1 34.3 1.0
O16 A:2PE148 4.7 0.3 1.0
CE2 A:PHE90 4.7 31.5 1.0
O A:MSE26 4.7 30.5 1.0
CZ A:PHE100 4.9 31.7 1.0
CD2 A:LEU125 5.0 33.0 1.0
CD1 A:TYR94 5.0 38.5 1.0
CD1 A:PHE100 5.0 35.4 1.0

Chlorine binding site 2 out of 4 in 3hhl

Go back to Chlorine Binding Sites List in 3hhl
Chlorine binding site 2 out of 4 in the Crystal Structure of Methylated RPA0582 Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Methylated RPA0582 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl143

b:55.0
occ:1.00
C17 B:PE8148 3.2 99.8 1.0
OH B:TYR94 3.2 46.9 1.0
ND2 B:ASN28 3.3 36.9 1.0
C15 B:PE8148 3.4 98.3 1.0
O16 B:PE8148 3.7 98.5 1.0
CB B:MSE26 3.7 32.8 1.0
CB B:ALA92 3.8 32.5 1.0
CE1 B:TYR94 3.9 38.9 1.0
OD1 B:ASN28 3.9 37.5 1.0
CD1 B:LEU125 4.0 33.8 1.0
CG B:ASN28 4.0 34.8 1.0
CZ B:TYR94 4.0 41.2 1.0
CE1 B:PHE100 4.1 33.1 1.0
C14 B:PE8148 4.1 98.3 1.0
CG B:MSE26 4.2 33.8 1.0
C18 B:PE8148 4.5 0.7 1.0
O B:MSE26 4.7 31.4 1.0
CE2 B:PHE90 4.7 33.6 1.0
CD2 B:LEU125 4.8 28.6 1.0
CZ B:PHE100 4.8 32.6 1.0
O19 B:PE8148 5.0 0.2 1.0
CG B:LEU125 5.0 34.4 1.0
CD1 B:PHE100 5.0 35.6 1.0

Chlorine binding site 3 out of 4 in 3hhl

Go back to Chlorine Binding Sites List in 3hhl
Chlorine binding site 3 out of 4 in the Crystal Structure of Methylated RPA0582 Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Methylated RPA0582 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl144

b:55.6
occ:1.00
ND2 C:ASN28 3.2 33.1 1.0
OH C:TYR94 3.2 48.4 1.0
C17 C:PE8148 3.2 0.1 1.0
O16 C:PE8148 3.6 0.1 1.0
CB C:MSE26 3.6 33.4 1.0
C18 C:PE8148 3.7 0.0 1.0
CB C:ALA92 3.7 30.9 1.0
O19 C:PE8148 3.7 0.8 1.0
CE1 C:TYR94 3.8 40.0 1.0
CD1 C:LEU125 3.9 36.7 1.0
CZ C:TYR94 4.0 42.9 1.0
OD1 C:ASN28 4.0 36.7 1.0
CG C:ASN28 4.0 33.2 1.0
CE1 C:PHE100 4.1 34.4 1.0
CG C:MSE26 4.2 34.5 1.0
O C:MSE26 4.6 32.8 1.0
CE2 C:PHE90 4.7 31.1 1.0
CD2 C:LEU125 4.8 34.2 1.0
C15 C:PE8148 4.9 0.3 1.0
CZ C:PHE100 4.9 33.5 1.0
C20 C:PE8148 4.9 0.1 1.0
CG C:LEU125 5.0 35.5 1.0
CA C:MSE26 5.0 33.3 1.0

Chlorine binding site 4 out of 4 in 3hhl

Go back to Chlorine Binding Sites List in 3hhl
Chlorine binding site 4 out of 4 in the Crystal Structure of Methylated RPA0582 Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Methylated RPA0582 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl143

b:54.8
occ:1.00
O19 D:2PE146 3.2 0.8 1.0
OH D:TYR94 3.2 47.4 1.0
ND2 D:ASN28 3.3 36.8 1.0
C18 D:2PE146 3.5 0.9 1.0
C17 D:2PE146 3.6 0.1 1.0
CB D:MSE26 3.6 32.8 1.0
C20 D:2PE146 3.8 0.9 1.0
CE1 D:TYR94 3.8 39.5 1.0
CB D:ALA92 3.8 33.6 1.0
CZ D:TYR94 3.9 41.2 1.0
CD1 D:LEU125 4.0 34.5 1.0
OD1 D:ASN28 4.0 36.7 1.0
CE1 D:PHE100 4.0 35.2 1.0
CG D:MSE26 4.1 35.1 1.0
CG D:ASN28 4.1 34.7 1.0
O16 D:2PE146 4.4 0.1 1.0
CE2 D:PHE90 4.7 32.6 1.0
O D:MSE26 4.8 31.9 1.0
CZ D:PHE100 4.8 33.5 1.0
CD2 D:LEU125 4.9 32.7 1.0
CD1 D:PHE100 5.0 37.1 1.0

Reference:

P.Sledz, E.Niedzialkowska, M.Chruszcz, P.Porebski, V.Yim, M.Kudritska, M.D.Zimmerman, E.Evdokimova, A.Savchenko, A.Edwards, A.Joachimiak, W.Minor. Crystal Structure of Methylated RPA0582 Protein To Be Published.
Page generated: Sat Jul 20 20:48:58 2024

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