Chlorine in PDB 3hjp: The Crystal Structure of BCP4 From Sulfolobus Solfataricus
Enzymatic activity of The Crystal Structure of BCP4 From Sulfolobus Solfataricus
All present enzymatic activity of The Crystal Structure of BCP4 From Sulfolobus Solfataricus:
1.11.1.15;
Protein crystallography data
The structure of The Crystal Structure of BCP4 From Sulfolobus Solfataricus, PDB code: 3hjp
was solved by
K.D'ambrosio,
G.De Simone,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
20.00 /
2.55
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
74.227,
64.142,
76.692,
90.00,
114.76,
90.00
|
R / Rfree (%)
|
20.4 /
26.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the The Crystal Structure of BCP4 From Sulfolobus Solfataricus
(pdb code 3hjp). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
The Crystal Structure of BCP4 From Sulfolobus Solfataricus, PDB code: 3hjp:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 3hjp
Go back to
Chlorine Binding Sites List in 3hjp
Chlorine binding site 1 out
of 4 in the The Crystal Structure of BCP4 From Sulfolobus Solfataricus
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of The Crystal Structure of BCP4 From Sulfolobus Solfataricus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl700
b:48.1
occ:1.00
|
OG1
|
A:THR42
|
2.7
|
35.6
|
1.0
|
OG
|
A:SER45
|
3.0
|
36.8
|
1.0
|
NH2
|
A:ARG119
|
3.1
|
30.3
|
1.0
|
CB
|
A:THR42
|
3.6
|
37.0
|
1.0
|
CB
|
A:PRO38
|
3.8
|
26.1
|
1.0
|
N
|
A:ALA39
|
3.8
|
27.0
|
1.0
|
CB
|
A:SER45
|
3.8
|
36.9
|
1.0
|
O
|
A:HOH213
|
3.8
|
46.2
|
1.0
|
O
|
A:ALA39
|
3.9
|
32.8
|
1.0
|
CG2
|
A:THR42
|
4.0
|
35.1
|
1.0
|
CZ
|
A:ARG119
|
4.1
|
28.6
|
1.0
|
CG
|
A:PRO38
|
4.1
|
26.6
|
1.0
|
N
|
A:SER45
|
4.2
|
39.3
|
1.0
|
CD
|
A:PRO38
|
4.2
|
26.1
|
1.0
|
NH1
|
A:ARG119
|
4.3
|
25.7
|
1.0
|
CA
|
A:ALA39
|
4.5
|
30.4
|
1.0
|
CA
|
A:SER45
|
4.5
|
39.6
|
1.0
|
CA
|
A:PRO38
|
4.6
|
25.5
|
1.0
|
C
|
A:ALA39
|
4.6
|
32.6
|
1.0
|
C
|
A:PRO38
|
4.6
|
25.3
|
1.0
|
CB
|
A:ALA39
|
4.7
|
30.1
|
1.0
|
N
|
A:PRO38
|
4.7
|
26.3
|
1.0
|
CA
|
A:THR42
|
4.9
|
38.2
|
1.0
|
CB
|
A:VAL44
|
5.0
|
36.8
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 3hjp
Go back to
Chlorine Binding Sites List in 3hjp
Chlorine binding site 2 out
of 4 in the The Crystal Structure of BCP4 From Sulfolobus Solfataricus
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of The Crystal Structure of BCP4 From Sulfolobus Solfataricus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl800
b:69.4
occ:1.00
|
OG
|
B:SER45
|
2.9
|
50.4
|
1.0
|
OG1
|
B:THR42
|
2.9
|
43.1
|
1.0
|
NH2
|
B:ARG119
|
2.9
|
45.4
|
1.0
|
CB
|
B:PRO38
|
3.4
|
33.0
|
1.0
|
N
|
B:ALA39
|
3.7
|
34.1
|
1.0
|
CG
|
B:PRO38
|
3.7
|
33.8
|
1.0
|
CD
|
B:PRO38
|
3.8
|
32.2
|
1.0
|
CB
|
B:THR42
|
3.8
|
43.1
|
1.0
|
CB
|
B:SER45
|
3.8
|
50.4
|
1.0
|
O
|
B:ALA39
|
3.9
|
33.6
|
1.0
|
CZ
|
B:ARG119
|
4.0
|
43.9
|
1.0
|
N
|
B:SER45
|
4.2
|
51.7
|
1.0
|
CG2
|
B:THR42
|
4.3
|
43.5
|
1.0
|
CA
|
B:PRO38
|
4.3
|
31.7
|
1.0
|
NH1
|
B:ARG119
|
4.4
|
45.4
|
1.0
|
N
|
B:PRO38
|
4.4
|
31.9
|
1.0
|
C
|
B:PRO38
|
4.5
|
32.2
|
1.0
|
CA
|
B:ALA39
|
4.6
|
33.3
|
1.0
|
CA
|
B:SER45
|
4.6
|
51.1
|
1.0
|
C
|
B:ALA39
|
4.7
|
33.8
|
1.0
|
CB
|
B:ALA39
|
4.7
|
30.4
|
1.0
|
O
|
B:PRO139
|
4.8
|
63.0
|
1.0
|
CB
|
B:VAL44
|
4.9
|
51.1
|
1.0
|
CB
|
B:PRO139
|
5.0
|
60.2
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 3hjp
Go back to
Chlorine Binding Sites List in 3hjp
Chlorine binding site 3 out
of 4 in the The Crystal Structure of BCP4 From Sulfolobus Solfataricus
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of The Crystal Structure of BCP4 From Sulfolobus Solfataricus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl600
b:57.9
occ:1.00
|
OG1
|
C:THR42
|
2.8
|
43.4
|
1.0
|
OG
|
C:SER45
|
3.0
|
36.9
|
1.0
|
NH2
|
C:ARG119
|
3.1
|
37.6
|
1.0
|
N
|
C:ALA39
|
3.4
|
28.1
|
1.0
|
CB
|
C:PRO38
|
3.4
|
32.0
|
1.0
|
O
|
C:ALA39
|
3.5
|
30.0
|
1.0
|
CB
|
C:SER45
|
3.7
|
35.0
|
1.0
|
CB
|
C:THR42
|
3.7
|
40.9
|
1.0
|
CD
|
C:PRO38
|
3.8
|
33.1
|
1.0
|
CG
|
C:PRO38
|
3.8
|
32.5
|
1.0
|
CG2
|
C:THR42
|
4.1
|
40.7
|
1.0
|
CZ
|
C:ARG119
|
4.1
|
36.1
|
1.0
|
CA
|
C:PRO38
|
4.2
|
30.5
|
1.0
|
CA
|
C:ALA39
|
4.2
|
28.8
|
1.0
|
N
|
C:PRO38
|
4.3
|
31.5
|
1.0
|
O
|
C:HOH222
|
4.3
|
49.7
|
1.0
|
C
|
C:PRO38
|
4.3
|
29.7
|
1.0
|
C
|
C:ALA39
|
4.3
|
30.3
|
1.0
|
N
|
C:SER45
|
4.3
|
35.2
|
1.0
|
NH1
|
C:ARG119
|
4.3
|
38.2
|
1.0
|
CB
|
C:ALA39
|
4.5
|
25.9
|
1.0
|
CA
|
C:SER45
|
4.5
|
34.3
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 3hjp
Go back to
Chlorine Binding Sites List in 3hjp
Chlorine binding site 4 out
of 4 in the The Crystal Structure of BCP4 From Sulfolobus Solfataricus
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of The Crystal Structure of BCP4 From Sulfolobus Solfataricus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl900
b:57.4
occ:1.00
|
OG1
|
D:THR42
|
3.0
|
35.9
|
1.0
|
NH2
|
D:ARG119
|
3.1
|
41.2
|
1.0
|
OG
|
D:SER45
|
3.1
|
44.0
|
1.0
|
CB
|
D:PRO38
|
3.2
|
35.4
|
1.0
|
CG
|
D:PRO38
|
3.6
|
31.7
|
1.0
|
N
|
D:ALA39
|
3.7
|
37.0
|
1.0
|
CB
|
D:THR42
|
3.7
|
35.5
|
1.0
|
O
|
D:ALA39
|
3.9
|
34.8
|
1.0
|
CD
|
D:PRO38
|
3.9
|
32.6
|
1.0
|
CB
|
D:SER45
|
4.0
|
42.6
|
1.0
|
CG2
|
D:THR42
|
4.1
|
28.9
|
1.0
|
CA
|
D:PRO38
|
4.2
|
34.7
|
1.0
|
CZ
|
D:ARG119
|
4.3
|
40.9
|
1.0
|
C
|
D:PRO38
|
4.4
|
35.8
|
1.0
|
N
|
D:SER45
|
4.4
|
43.6
|
1.0
|
N
|
D:PRO38
|
4.5
|
35.1
|
1.0
|
CA
|
D:ALA39
|
4.6
|
37.3
|
1.0
|
C
|
D:ALA39
|
4.7
|
35.7
|
1.0
|
NH1
|
D:ARG119
|
4.7
|
42.4
|
1.0
|
CB
|
D:ALA39
|
4.7
|
36.7
|
1.0
|
CA
|
D:SER45
|
4.8
|
42.5
|
1.0
|
CB
|
D:PRO139
|
4.9
|
52.6
|
1.0
|
|
Reference:
D.Limauro,
K.D'ambrosio,
E.Pedone,
E.Langella,
I.Galdi,
C.Pedone,
G.De Simone,
S.Bartolucci.
Exploring the Catalytic Mechanism of the First Dimeric Bcp: Functional, Structural and Docking Analysis To Be Published.
Page generated: Sat Jul 20 20:52:31 2024
|