Atomistry » Chlorine » PDB 3hcx-3hl6 » 3hjz
Atomistry »
  Chlorine »
    PDB 3hcx-3hl6 »
      3hjz »

Chlorine in PDB 3hjz: The Structure of An Aldolase From Prochlorococcus Marinus

Enzymatic activity of The Structure of An Aldolase From Prochlorococcus Marinus

All present enzymatic activity of The Structure of An Aldolase From Prochlorococcus Marinus:
2.2.1.2;

Protein crystallography data

The structure of The Structure of An Aldolase From Prochlorococcus Marinus, PDB code: 3hjz was solved by A.U.Singer, X.Xu, H.Cui, A.Joachimiak, A.M.Edwards, A.Savchenko, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.19 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.755, 80.376, 97.866, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 20.3

Other elements in 3hjz:

The structure of The Structure of An Aldolase From Prochlorococcus Marinus also contains other interesting chemical elements:

Sodium (Na) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of An Aldolase From Prochlorococcus Marinus (pdb code 3hjz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The Structure of An Aldolase From Prochlorococcus Marinus, PDB code: 3hjz:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3hjz

Go back to Chlorine Binding Sites List in 3hjz
Chlorine binding site 1 out of 3 in the The Structure of An Aldolase From Prochlorococcus Marinus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of An Aldolase From Prochlorococcus Marinus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl344

b:31.6
occ:1.00
O A:HOH529 2.9 15.0 1.0
N A:TRP140 3.1 11.5 1.0
CA A:THR139 3.5 10.8 1.0
CB A:THR139 3.6 11.5 1.0
CE2 A:PHE285 3.6 13.8 1.0
C A:THR139 3.8 11.1 1.0
CB A:TRP140 4.0 11.3 1.0
CA A:TRP140 4.1 11.2 1.0
CG2 A:THR139 4.2 10.1 1.0
NH1 A:ARG286 4.4 13.9 1.0
CD2 A:LEU299 4.4 9.2 1.0
OE2 A:GLU141 4.4 16.3 1.0
CZ A:PHE285 4.5 12.1 1.0
CD2 A:PHE285 4.5 9.9 1.0
CE1 A:PHE106 4.7 23.6 1.0
O A:HOH467 4.8 20.6 1.0
OG1 A:THR139 4.8 10.4 1.0
N A:THR139 4.8 9.6 1.0
O A:THR139 5.0 10.9 1.0

Chlorine binding site 2 out of 3 in 3hjz

Go back to Chlorine Binding Sites List in 3hjz
Chlorine binding site 2 out of 3 in the The Structure of An Aldolase From Prochlorococcus Marinus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of An Aldolase From Prochlorococcus Marinus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl345

b:60.4
occ:1.00
CD2 A:HIS327 3.3 30.0 1.0
NE2 A:HIS327 3.7 29.4 1.0
O A:HOH365 3.8 28.1 1.0
CG A:LYS328 3.9 28.1 1.0
CA A:LYS328 3.9 23.1 1.0
O A:HOH686 4.0 21.7 1.0
N A:LYS328 4.3 21.9 1.0
CB A:LYS328 4.3 23.3 1.0
CG A:HIS327 4.5 26.0 1.0
O A:HIS327 4.6 22.0 1.0
C A:HIS327 4.7 22.5 1.0
CB A:SER331 4.7 22.6 1.0
CD A:LYS328 4.9 32.4 1.0
OG A:SER331 4.9 24.5 1.0
CE1 A:HIS327 4.9 29.6 1.0
CE A:LYS328 4.9 34.4 1.0

Chlorine binding site 3 out of 3 in 3hjz

Go back to Chlorine Binding Sites List in 3hjz
Chlorine binding site 3 out of 3 in the The Structure of An Aldolase From Prochlorococcus Marinus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Structure of An Aldolase From Prochlorococcus Marinus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl346

b:54.3
occ:1.00
O A:HOH603 2.9 33.1 1.0
NZ A:LYS190 3.1 21.8 1.0
CE A:LYS190 3.6 17.5 1.0
O A:HOH646 4.9 28.2 1.0

Reference:

L.R.Thompson, Q.Zeng, L.Kelly, K.H.Huang, A.U.Singer, J.Stubbe, S.W.Chisholm. Phage Auxiliary Metabolic Genes and the Redirection of Cyanobacterial Host Carbon Metabolism. Proc.Natl.Acad.Sci.Usa V. 108 E757 2011.
ISSN: ISSN 0027-8424
PubMed: 21844365
DOI: 10.1073/PNAS.1102164108
Page generated: Sat Dec 12 09:45:55 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy