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Chlorine in PDB 3hmu: Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi

Protein crystallography data

The structure of Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi, PDB code: 3hmu was solved by R.Toro, J.B.Bonanno, U.Ramagopal, J.Freeman, K.T.Bain, S.Miller, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 64.246, 113.605, 130.985, 90.00, 90.00, 90.00
R / Rfree (%) 15 / 19.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi (pdb code 3hmu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi, PDB code: 3hmu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3hmu

Go back to Chlorine Binding Sites List in 3hmu
Chlorine binding site 1 out of 2 in the Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl472

b:19.0
occ:1.00
O A:HOH566 3.1 30.6 1.0
NH1 A:ARG422 3.2 10.8 1.0
O A:HOH687 3.4 33.1 1.0
ND2 A:ASN189 3.4 9.3 1.0
CB A:ALA192 3.6 11.2 1.0
CG A:ARG422 3.7 8.8 1.0
CD A:ARG422 3.7 8.9 1.0
CD1 A:TRP191 3.8 11.5 1.0
O A:HOH582 4.1 18.3 1.0
OD1 A:ASN189 4.2 10.7 1.0
CG A:ASN189 4.2 10.2 1.0
CZ A:ARG422 4.2 12.4 1.0
NE A:ARG422 4.4 11.5 1.0
CA A:ALA192 4.5 11.5 1.0
N A:ALA192 4.5 10.3 1.0
CG A:TRP191 4.7 12.2 1.0
CB A:ALA383 4.7 8.1 1.0
NE1 A:TRP191 4.7 12.1 1.0
O A:HOH659 4.7 20.2 1.0
O A:HOH916 4.8 18.2 1.0
CB A:TRP191 4.8 10.9 1.0
O A:HOH742 4.9 32.1 1.0

Chlorine binding site 2 out of 2 in 3hmu

Go back to Chlorine Binding Sites List in 3hmu
Chlorine binding site 2 out of 2 in the Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl472

b:18.2
occ:1.00
O B:HOH737 3.0 19.0 1.0
NH1 B:ARG422 3.1 9.8 1.0
ND2 B:ASN189 3.5 7.3 1.0
CD B:ARG422 3.7 10.9 1.0
CB B:ALA192 3.7 11.9 1.0
CD1 B:TRP191 3.8 9.2 1.0
CG B:ARG422 3.9 8.2 1.0
CZ B:ARG422 4.2 13.6 1.0
OD1 B:ASN189 4.3 9.2 1.0
CG B:ASN189 4.3 10.1 1.0
O B:HOH482 4.3 16.6 1.0
NE B:ARG422 4.4 11.1 1.0
NE1 B:TRP191 4.6 11.4 1.0
N B:ALA192 4.6 10.4 1.0
CA B:ALA192 4.6 10.5 1.0
CG B:TRP191 4.7 10.4 1.0
CB B:ALA383 4.7 8.9 1.0
O B:HOH557 4.8 15.8 1.0
CB B:TRP191 4.9 9.4 1.0

Reference:

R.Toro, J.B.Bonanno, U.Ramagopal, J.Freeman, K.T.Bain, S.Miller, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of A Class III Aminotransferase From Silicibacter Pomeroyi To Be Published.
Page generated: Sat Dec 12 09:46:13 2020

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