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Chlorine in PDB 3i2f: Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct

Protein crystallography data

The structure of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct, PDB code: 3i2f was solved by J.J.G.Tesmer, M.R.Nance, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.50
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 106.250, 106.250, 220.041, 90.00, 90.00, 120.00
R / Rfree (%) 17.3 / 20.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct (pdb code 3i2f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct, PDB code: 3i2f:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Chlorine binding site 1 out of 8 in 3i2f

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Chlorine binding site 1 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl588

b:59.5
occ:1.00
N A:LYS298 3.4 37.8 1.0
NH1 A:ARG472 3.5 39.4 1.0
O A:LYS298 3.6 38.4 1.0
NH1 A:ARG297 3.9 35.6 1.0
CD A:ARG297 4.1 34.3 1.0
CB A:LYS298 4.1 39.2 1.0
CA A:LYS298 4.1 38.5 1.0
CA A:ARG297 4.2 37.4 1.0
C A:ARG297 4.3 37.7 1.0
C A:LYS298 4.3 38.0 1.0
NH2 A:ARG472 4.4 41.5 1.0
CZ A:ARG472 4.4 41.2 1.0
CZ A:ARG297 4.8 35.9 1.0
O A:ASP296 4.8 37.3 1.0
NE A:ARG297 4.8 36.2 1.0
CG A:ARG297 4.8 36.2 1.0

Chlorine binding site 2 out of 8 in 3i2f

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Chlorine binding site 2 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl589

b:75.5
occ:1.00
N A:GLU83 2.9 50.9 1.0
NH1 A:ARG75 3.1 43.3 1.0
CA A:GLY82 3.3 49.0 1.0
CD A:ARG75 3.5 43.4 1.0
C A:GLY82 3.6 49.7 1.0
CG A:ARG75 3.9 42.6 1.0
O A:GLU83 3.9 50.5 1.0
CA A:GLU83 3.9 51.5 1.0
CG A:GLU83 4.0 55.5 1.0
CB A:GLU83 4.1 52.2 1.0
CZ A:ARG75 4.1 44.4 1.0
NE A:ARG75 4.3 44.9 1.0
CG2 A:VAL20 4.3 47.1 1.0
C A:GLU83 4.4 51.0 1.0
N A:GLY82 4.6 48.9 1.0
CG1 A:VAL20 4.7 46.8 1.0
O A:GLY82 4.8 49.0 1.0
OD2 A:ASP18 4.9 52.8 1.0
CB A:VAL20 5.0 47.1 1.0
CD A:GLU83 5.0 59.8 1.0

Chlorine binding site 3 out of 8 in 3i2f

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Chlorine binding site 3 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl590

b:46.5
occ:0.50
O A:PRO354 2.5 37.1 0.5
O A:HOH879 3.2 52.9 1.0
CB A:ASP355 3.5 37.6 0.5
CD A:PRO354 3.5 37.7 0.5
N A:ASP355 3.6 37.9 0.5
C A:PRO354 3.7 37.3 0.5
OD2 A:ASP355 3.7 38.4 0.5
CG A:ASP355 3.8 37.9 0.5
CB A:LEU353 4.0 36.8 1.0
CB A:ASP355 4.0 37.0 0.5
N A:PRO354 4.1 37.7 0.5
CA A:ASP355 4.1 37.6 0.5
N A:PRO354 4.2 37.4 0.5
CD2 A:LEU353 4.3 36.9 1.0
CD A:PRO354 4.3 37.5 0.5
CG A:LEU353 4.3 37.2 1.0
CA A:PRO354 4.5 37.3 0.5
CG A:PRO354 4.5 37.8 0.5
CG2 A:ILE572 4.5 39.2 1.0
C A:LEU353 4.5 37.2 1.0
C A:PRO354 4.7 38.0 0.5
CA A:LEU353 4.7 37.2 1.0
N A:ASP355 4.7 36.9 0.5
OE1 A:GLU348 4.7 50.4 1.0
OD1 A:ASP355 4.7 38.7 0.5
CB A:PRO354 4.7 37.2 0.5
C A:ASP355 4.7 37.2 0.5
CA A:PRO354 4.8 37.8 0.5
CA A:ASP355 4.8 36.9 0.5
CB A:PRO354 4.9 37.8 0.5
CG A:ASP355 4.9 37.0 0.5
CD1 A:ILE572 4.9 38.4 1.0

Chlorine binding site 4 out of 8 in 3i2f

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Chlorine binding site 4 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl591

b:59.3
occ:1.00
N A:TRP345 3.1 38.4 1.0
CA A:GLU344 3.8 40.0 1.0
CD1 A:TRP345 3.8 33.0 1.0
CB A:TRP345 3.9 36.7 1.0
C A:GLU344 3.9 39.2 1.0
CA A:TRP345 4.0 38.2 1.0
CB A:GLU344 4.1 40.3 1.0
CG A:GLU344 4.1 44.0 1.0
CB A:ALA302 4.2 37.2 1.0
CG A:TRP345 4.2 35.5 1.0
O A:TRP345 4.4 38.9 1.0
O A:HOH671 4.7 44.4 1.0
O A:ASP343 4.8 39.8 1.0
C A:TRP345 4.8 39.0 1.0
NE1 A:TRP345 5.0 32.9 1.0

Chlorine binding site 5 out of 8 in 3i2f

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Chlorine binding site 5 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl597

b:86.8
occ:1.00
NH2 A:ARG556 3.6 54.4 1.0
NH1 A:ARG556 3.8 54.3 1.0
CZ A:ARG556 4.2 54.5 1.0

Chlorine binding site 6 out of 8 in 3i2f

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Chlorine binding site 6 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl598

b:81.5
occ:1.00
NE2 A:HIS563 3.6 53.5 1.0
O A:HOH809 4.0 49.4 1.0
CD1 A:ILE500 4.1 46.6 1.0
CE1 A:HIS563 4.3 53.1 1.0
CB A:ILE500 4.5 46.9 1.0
CD2 A:HIS563 4.6 52.9 1.0
CG1 A:ILE500 4.8 46.7 1.0
CG2 A:ILE500 5.0 46.5 1.0

Chlorine binding site 7 out of 8 in 3i2f

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Chlorine binding site 7 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl599

b:80.4
occ:1.00
O A:HOH839 3.1 59.2 1.0
NH1 A:ARG28 3.6 42.6 1.0
NH2 A:ARG28 3.8 42.8 1.0
CZ A:ARG28 4.1 41.9 1.0

Chlorine binding site 8 out of 8 in 3i2f

Go back to Chlorine Binding Sites List in 3i2f
Chlorine binding site 8 out of 8 in the Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Cocaine Esterase with Mutations T172R / G173Q, Bound to Dtt Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl600

b:72.5
occ:1.00
O A:HOH806 3.1 63.9 1.0
NH2 A:ARG519 3.5 44.1 1.0
NH1 A:ARG519 3.7 43.4 1.0
CZ A:ARG519 4.1 42.8 1.0
CA A:GLU433 4.5 45.5 1.0
CG A:GLU433 4.5 49.1 1.0
O A:HOH803 4.7 55.8 1.0
CB A:GLU433 4.8 45.4 1.0

Reference:

D.Narasimhan, M.R.Nance, D.Gao, M.C.Ko, J.Macdonald, P.Tamburi, D.Yoon, D.M.Landry, J.H.Woods, C.G.Zhan, J.J.Tesmer, R.K.Sunahara. Structural Analysis of Thermostabilizing Mutations of Cocaine Esterase. Protein Eng.Des.Sel. V. 23 537 2010.
ISSN: ISSN 1741-0126
PubMed: 20436035
DOI: 10.1093/PROTEIN/GZQ025
Page generated: Sat Jul 20 21:11:41 2024

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