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Chlorine in PDB 3ib1: Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin

Protein crystallography data

The structure of Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin, PDB code: 3ib1 was solved by R.Mir, N.Singh, M.Sinha, S.Sharma, P.Kaur, A.Srinivasan, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.99 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.839, 50.654, 66.119, 90.00, 107.56, 90.00
R / Rfree (%) 20.9 / 24.4

Other elements in 3ib1:

The structure of Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin also contains other interesting chemical elements:

Iron (Fe) 1 atom
Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin (pdb code 3ib1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin, PDB code: 3ib1:

Chlorine binding site 1 out of 1 in 3ib1

Go back to Chlorine Binding Sites List in 3ib1
Chlorine binding site 1 out of 1 in the Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Basis of the Prevention of Nsaid-Induced Damage of the Gastrointestinal Tract By C-Terminal Half (C-Lobe) of Bovine Colostrum Protein Lactoferrin: Binding and Structural Studies of C- Lobe Complex with Indomethacin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl701

b:79.8
occ:1.00
CL A:IMN701 0.0 79.8 1.0
C13 A:IMN701 1.8 75.9 1.0
C12 A:IMN701 2.7 75.5 1.0
C14 A:IMN701 2.8 75.1 1.0
CB A:PRO429 2.8 46.5 1.0
O A:THR430 3.1 46.6 1.0
CA A:PRO429 3.2 46.8 1.0
N A:THR430 3.3 46.5 1.0
C A:PRO429 3.4 46.8 1.0
C A:THR430 3.9 46.2 1.0
C11 A:IMN701 4.0 74.0 1.0
CG A:PRO429 4.1 47.2 1.0
C15 A:IMN701 4.1 73.8 1.0
CA A:THR430 4.2 46.3 1.0
O A:PRO429 4.3 46.6 1.0
OG1 A:THR430 4.3 46.6 1.0
C10 A:IMN701 4.6 73.6 1.0
N A:PRO429 4.6 47.3 1.0
CB A:THR430 4.9 45.9 1.0

Reference:

R.Mir, N.Singh, G.Vikram, R.P.Kumar, M.Sinha, A.Bhushan, P.Kaur, A.Srinivasan, S.Sharma, T.P.Singh. The Structural Basis For the Prevention of Nonsteroidal Antiinflammatory Drug-Induced Gastrointestinal Tract Damage By the C-Lobe of Bovine Colostrum Lactoferrin Biophys.J. V. 97 3178 2009.
ISSN: ISSN 0006-3495
PubMed: 20006955
DOI: 10.1016/J.BPJ.2009.09.030
Page generated: Sat Jul 20 21:26:21 2024

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