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Chlorine in PDB 3ive: Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine

Protein crystallography data

The structure of Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine, PDB code: 3ive was solved by U.A.Ramagopal, R.Toro, S.K.Burley, S.C.Almo, New York Sgx Research Centerfor Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 156.261, 77.453, 47.518, 90.00, 103.83, 90.00
R / Rfree (%) 16.5 / 19

Other elements in 3ive:

The structure of Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine also contains other interesting chemical elements:

Manganese (Mn) 1 atom
Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine (pdb code 3ive). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine, PDB code: 3ive:

Chlorine binding site 1 out of 1 in 3ive

Go back to Chlorine Binding Sites List in 3ive
Chlorine binding site 1 out of 1 in the Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:13.9
occ:1.00
O A:HOH859 3.1 20.7 1.0
N A:GLY214 3.2 14.0 1.0
N A:ALA171 3.3 9.8 1.0
CA A:GLY168 3.6 9.7 1.0
CB A:ALA171 3.7 10.0 1.0
CB A:GLU213 3.8 11.4 1.0
CB A:PHE170 3.8 10.9 1.0
CA A:GLU213 3.8 12.1 1.0
CE A:LYS233 3.8 19.0 1.0
C A:GLY168 3.8 9.9 1.0
N A:PHE170 3.9 10.2 1.0
C A:GLU213 4.0 13.2 1.0
CA A:GLY214 4.0 15.1 1.0
CA A:ALA171 4.1 9.9 1.0
CA A:PHE170 4.1 10.0 1.0
C A:PHE170 4.2 10.4 1.0
O A:GLY214 4.2 16.5 1.0
O A:GLY168 4.2 8.8 1.0
N A:VAL169 4.3 8.9 1.0
CD2 A:PHE170 4.4 12.8 1.0
CG A:LYS233 4.4 14.7 1.0
N A:GLY168 4.6 9.4 1.0
OE2 A:GLU189 4.6 17.7 1.0
C A:GLY214 4.6 16.1 1.0
CD A:LYS233 4.6 15.8 1.0
CG A:PHE170 4.6 12.7 1.0
NZ A:LYS233 4.7 21.9 1.0
C A:VAL169 4.8 9.4 1.0
CG A:GLU213 5.0 12.3 1.0

Reference:

U.A.Ramagopal, R.Toro, S.K.Burley, S.C.Almo. Putative 5'-Nucleotidase (C4898) From Escherichia Coli in Complex with Cytidine To Be Published.
Page generated: Sat Dec 12 09:49:08 2020

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