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Chlorine in PDB 3iwf: The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A

Protein crystallography data

The structure of The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A, PDB code: 3iwf was solved by A.J.Stein, A.Sather, M.Borovilos, M.Bargassa, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.70 / 1.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 48.921, 54.028, 173.044, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 20.5

Other elements in 3iwf:

The structure of The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A also contains other interesting chemical elements:

Nickel (Ni) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A (pdb code 3iwf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A, PDB code: 3iwf:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3iwf

Go back to Chlorine Binding Sites List in 3iwf
Chlorine binding site 1 out of 2 in the The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl108

b:20.7
occ:1.00
O A:HOH114 3.2 16.9 1.0
OD1 A:ASN10 3.4 15.6 1.0
CD1 A:TYR6 3.4 18.4 1.0
CE1 A:TYR6 3.5 21.7 1.0
CG A:ASN10 4.3 12.2 1.0
ND2 A:ASN10 4.4 9.4 1.0
O B:HOH174 4.4 22.1 1.0
CG A:TYR6 4.7 16.7 1.0
CZ A:TYR6 4.9 22.5 1.0
CB A:ASP9 5.0 11.2 1.0
OD2 A:ASP9 5.0 12.4 1.0

Chlorine binding site 2 out of 2 in 3iwf

Go back to Chlorine Binding Sites List in 3iwf
Chlorine binding site 2 out of 2 in the The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl110

b:22.3
occ:1.00
ND1 A:HIS31 3.1 15.9 1.0
O B:HOH126 3.3 20.0 1.0
OD1 B:ASN10 3.4 17.1 1.0
CD1 B:TYR6 3.5 20.2 1.0
CE1 B:TYR6 3.5 22.2 1.0
CA A:LYS32 3.8 18.1 1.0
CB A:LYS32 3.8 19.2 1.0
N A:LYS32 3.8 16.5 1.0
CE1 A:HIS31 3.8 15.9 1.0
CG A:HIS31 4.1 14.6 1.0
CG A:LYS32 4.2 21.5 1.0
CG B:ASN10 4.3 14.1 1.0
C A:HIS31 4.4 15.6 1.0
ND2 B:ASN10 4.4 11.2 1.0
CB A:HIS31 4.4 14.8 1.0
CG B:TYR6 4.8 17.9 1.0
O A:HIS31 4.8 17.1 1.0
CZ B:TYR6 4.8 22.3 1.0
CB B:ASP9 4.9 13.4 1.0

Reference:

A.J.Stein, A.Sather, M.Borovilos, M.Bargassa, A.Joachimiak. The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A To Be Published.
Page generated: Sat Dec 12 09:49:11 2020

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