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Chlorine in PDB 3jv9: The Structure of A Reduced Form of Oxyr From N. Meningitidis

Protein crystallography data

The structure of The Structure of A Reduced Form of Oxyr From N. Meningitidis, PDB code: 3jv9 was solved by S.Sainsbury, J.Ren, D.I.Stuart, R.J.Owens, Oxford Protein Productionfacility (Oppf), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.80 / 2.39
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.813, 56.075, 81.247, 90.00, 104.91, 90.00
R / Rfree (%) 22.4 / 28.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of A Reduced Form of Oxyr From N. Meningitidis (pdb code 3jv9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Structure of A Reduced Form of Oxyr From N. Meningitidis, PDB code: 3jv9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3jv9

Go back to Chlorine Binding Sites List in 3jv9
Chlorine binding site 1 out of 2 in the The Structure of A Reduced Form of Oxyr From N. Meningitidis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of A Reduced Form of Oxyr From N. Meningitidis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl307

b:68.6
occ:1.00
ND1 A:HIS130 3.5 32.1 1.0
O A:GLY197 3.6 54.6 1.0
CB A:THR129 3.7 35.2 1.0
N A:HIS130 3.7 41.9 1.0
CB A:HIS130 4.1 40.6 1.0
CG A:HIS130 4.3 35.6 1.0
C A:GLY197 4.3 50.8 1.0
OG1 A:THR129 4.3 36.1 1.0
CA A:GLY197 4.4 53.0 1.0
N A:THR129 4.4 30.9 1.0
CA A:THR129 4.4 37.1 1.0
CA A:HIS130 4.5 42.5 1.0
CG2 A:THR129 4.5 31.7 1.0
C A:THR129 4.5 43.0 1.0
O A:HOH9 4.5 40.4 1.0
CE1 A:HIS130 4.6 33.1 1.0

Chlorine binding site 2 out of 2 in 3jv9

Go back to Chlorine Binding Sites List in 3jv9
Chlorine binding site 2 out of 2 in the The Structure of A Reduced Form of Oxyr From N. Meningitidis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of A Reduced Form of Oxyr From N. Meningitidis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl78

b:54.6
occ:1.00
N B:ILE229 3.4 37.4 1.0
CB B:SER228 3.6 32.5 1.0
CB B:ILE229 3.8 37.9 1.0
CG1 B:ILE229 4.1 37.6 1.0
CA B:SER228 4.1 36.9 1.0
O B:PHE99 4.1 33.9 1.0
CA B:ILE229 4.2 36.6 1.0
CD1 B:ILE229 4.2 33.0 1.0
C B:SER228 4.3 44.4 1.0
OH B:TYR104 4.3 42.3 1.0
N B:ASN230 4.4 30.5 1.0
C B:PHE99 4.5 34.5 1.0
OG B:SER228 4.6 39.1 1.0
CA B:THR100 4.7 36.8 1.0
O B:HOH51 4.8 42.2 1.0
N B:THR100 4.8 30.4 1.0
CB B:PHE99 4.8 25.2 1.0
C B:ILE229 4.8 33.4 1.0
CG2 B:THR100 4.8 43.1 1.0

Reference:

S.Sainsbury, J.Ren, J.E.Nettleship, N.J.Saunders, D.I.Stuart, R.J.Owens. The Structure of A Reduced Form of Oxyr From Neisseria Meningitidis Bmc Struct.Biol. V. 10 10 2010.
ISSN: ESSN 1472-6807
PubMed: 20478059
DOI: 10.1186/1472-6807-10-10
Page generated: Sat Dec 12 09:49:40 2020

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