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Chlorine in PDB 3jxp: Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida

Protein crystallography data

The structure of Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida, PDB code: 3jxp was solved by M.Metlitzky, R.Schwarzenbacher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.70 / 2.20
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 86.209, 86.209, 109.406, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 24.3

Other elements in 3jxp:

The structure of Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida (pdb code 3jxp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida, PDB code: 3jxp:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3jxp

Go back to Chlorine Binding Sites List in 3jxp
Chlorine binding site 1 out of 2 in the Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl321

b:23.7
occ:1.00
O A:HOH357 3.1 23.6 1.0
N A:ILE91 3.2 15.9 1.0
CB A:PRO166 3.6 25.2 1.0
CA A:GLN90 3.6 16.3 1.0
CB A:GLN90 3.8 14.9 1.0
CG1 A:ILE91 3.9 14.5 1.0
CB A:ILE91 3.9 16.5 1.0
C A:GLN90 3.9 16.0 1.0
CA A:ILE91 4.1 16.1 1.0
CG A:GLN90 4.1 18.8 1.0
CD A:PRO167 4.2 23.0 1.0
CD1 A:ILE91 4.2 17.4 1.0
CA A:PRO166 4.4 26.1 1.0
CE2 A:TYR168 4.5 14.7 1.0
CG A:PRO166 4.6 26.9 1.0
CD2 A:TYR168 4.6 14.7 1.0
N A:GLN90 4.9 15.3 1.0
N A:PRO167 5.0 22.5 1.0

Chlorine binding site 2 out of 2 in 3jxp

Go back to Chlorine Binding Sites List in 3jxp
Chlorine binding site 2 out of 2 in the Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl322

b:44.4
occ:1.00
ND2 A:ASN18 3.3 18.8 1.0
CB A:ASN18 3.8 16.5 1.0
CG A:ASN18 4.0 18.5 1.0
CH2 A:TRP17 4.5 14.8 1.0
O A:ASN18 4.9 18.9 1.0
CZ2 A:TRP17 5.0 14.9 1.0

Reference:

M.Metlitzky, S.Puehringer, S.J.Fisher. Crystal Structure of Pqqb From Pseudomonas Putida at 2.2 A Resolution J. Biophys. Chem. V. 3 206 2012.
ISSN: ISSN 2153-036X
DOI: 10.4236/JBPC.2012.32023
Page generated: Sat Dec 12 09:49:47 2020

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