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Chlorine in PDB 3k4i: Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000

Protein crystallography data

The structure of Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000, PDB code: 3k4i was solved by V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.69
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 34.442, 124.857, 66.912, 90.00, 97.99, 90.00
R / Rfree (%) 17.8 / 21.4

Other elements in 3k4i:

The structure of Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000 also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000 (pdb code 3k4i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000, PDB code: 3k4i:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3k4i

Go back to Chlorine Binding Sites List in 3k4i
Chlorine binding site 1 out of 3 in the Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:12.2
occ:1.00
O C:HOH388 3.1 22.9 1.0
O A:HOH322 3.1 22.4 1.0
O A:HOH337 3.2 18.4 1.0
N A:MSE104 3.4 6.5 1.0
N A:GLY101 3.4 5.7 1.0
C A:GLY101 3.4 5.0 1.0
CG A:MSE104 3.4 9.1 1.0
CA A:GLY101 3.5 4.7 1.0
N A:ILE103 3.5 7.0 1.0
O A:GLY101 3.7 6.2 1.0
N A:ASP102 3.7 6.1 1.0
CB A:ILE103 3.7 9.1 1.0
SE A:MSE104 3.7 26.0 1.0
CB A:MSE104 3.9 13.3 1.0
CA A:ILE103 4.0 7.3 1.0
C A:ILE103 4.1 6.4 1.0
CA A:MSE104 4.3 7.9 1.0
C A:TRP100 4.3 5.8 1.0
C A:ASP102 4.4 6.1 1.0
OD1 A:ASP102 4.5 11.1 1.0
O A:HOH308 4.6 18.1 1.0
CG2 A:ILE103 4.6 11.1 1.0
CA A:ASP102 4.6 6.5 1.0
CG1 A:ILE103 4.7 12.7 1.0
CA A:TRP100 4.9 5.4 1.0

Chlorine binding site 2 out of 3 in 3k4i

Go back to Chlorine Binding Sites List in 3k4i
Chlorine binding site 2 out of 3 in the Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:20.2
occ:1.00
O B:HOH371 3.1 30.7 1.0
O A:HOH366 3.3 26.3 1.0
CE B:MSE104 3.3 26.9 1.0
N B:GLY101 3.4 12.1 1.0
N B:MSE104 3.4 16.1 1.0
CA B:GLY101 3.5 12.1 1.0
C B:GLY101 3.5 13.3 1.0
N B:ILE103 3.6 14.1 1.0
CG B:MSE104 3.6 26.6 1.0
CB B:ILE103 3.8 15.6 1.0
O B:GLY101 3.8 13.5 1.0
N B:ASP102 3.9 13.9 1.0
CA B:ILE103 4.0 14.8 1.0
CB B:MSE104 4.0 23.9 1.0
SE B:MSE104 4.1 35.8 1.0
C B:ILE103 4.2 14.9 1.0
CA B:MSE104 4.3 18.3 1.0
OD1 B:ASP102 4.4 18.5 1.0
C B:ASP102 4.4 14.6 1.0
C B:TRP100 4.5 12.0 1.0
CG1 B:ILE103 4.6 15.1 1.0
CG2 B:ILE103 4.7 15.3 1.0
CA B:ASP102 4.7 15.2 1.0
O B:HOH341 4.9 20.9 1.0
CD1 B:ILE103 4.9 16.9 1.0

Chlorine binding site 3 out of 3 in 3k4i

Go back to Chlorine Binding Sites List in 3k4i
Chlorine binding site 3 out of 3 in the Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl502

b:13.8
occ:1.00
O B:HOH264 3.1 25.3 1.0
O C:HOH255 3.3 29.8 1.0
N C:MSE104 3.3 8.0 1.0
N C:GLY101 3.4 6.7 1.0
C C:GLY101 3.4 8.4 1.0
CG C:MSE104 3.4 11.3 1.0
CA C:GLY101 3.5 7.0 1.0
N C:ILE103 3.5 8.1 1.0
SE C:MSE104 3.6 25.1 1.0
O C:GLY101 3.7 8.0 1.0
CB C:ILE103 3.7 9.2 1.0
N C:ASP102 3.7 8.7 1.0
CB C:MSE104 3.9 14.4 1.0
CA C:ILE103 4.0 8.3 1.0
C C:ILE103 4.2 7.8 1.0
CA C:MSE104 4.2 9.8 1.0
C C:ASP102 4.4 8.8 1.0
OD1 C:ASP102 4.4 11.4 1.0
C C:TRP100 4.4 7.6 1.0
CG1 C:ILE103 4.6 10.4 1.0
CA C:ASP102 4.6 9.0 1.0
CG2 C:ILE103 4.7 10.6 1.0
O C:HOH289 4.7 28.6 1.0
O C:HOH312 4.9 19.1 1.0
CD1 C:ILE103 5.0 10.6 1.0

Reference:

V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Uncharacterized Protein PSPTO_3204 From Pseudomonas Syringae Pv. Tomato Str. DC3000 To Be Published.
Page generated: Sat Jul 20 22:25:15 2024

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