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Chlorine in PDB 3k97: HSP90 N-Terminal Domain in Complex with 4-Chloro-6-{[(2R)-2- (2-Methylphenyl)Pyrrolidin-1-Yl]Carbonyl}Benzene-1,3-Diol

Protein crystallography data

The structure of HSP90 N-Terminal Domain in Complex with 4-Chloro-6-{[(2R)-2- (2-Methylphenyl)Pyrrolidin-1-Yl]Carbonyl}Benzene-1,3-Diol, PDB code: 3k97 was solved by K.S.Gajiwala, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.94 / 1.95
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 67.425, 87.476, 98.944, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 22.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the HSP90 N-Terminal Domain in Complex with 4-Chloro-6-{[(2R)-2- (2-Methylphenyl)Pyrrolidin-1-Yl]Carbonyl}Benzene-1,3-Diol (pdb code 3k97). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the HSP90 N-Terminal Domain in Complex with 4-Chloro-6-{[(2R)-2- (2-Methylphenyl)Pyrrolidin-1-Yl]Carbonyl}Benzene-1,3-Diol, PDB code: 3k97:

Chlorine binding site 1 out of 1 in 3k97

Go back to Chlorine Binding Sites List in 3k97
Chlorine binding site 1 out of 1 in the HSP90 N-Terminal Domain in Complex with 4-Chloro-6-{[(2R)-2- (2-Methylphenyl)Pyrrolidin-1-Yl]Carbonyl}Benzene-1,3-Diol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of HSP90 N-Terminal Domain in Complex with 4-Chloro-6-{[(2R)-2- (2-Methylphenyl)Pyrrolidin-1-Yl]Carbonyl}Benzene-1,3-Diol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl901

b:26.7
occ:1.00
CL1 A:4CD901 0.0 26.7 1.0
C14 A:4CD901 1.7 25.2 1.0
C13 A:4CD901 2.7 23.2 1.0
C15 A:4CD901 2.8 24.2 1.0
O2 A:4CD901 3.0 24.5 1.0
CD1 A:PHE138 3.4 23.7 1.0
ND2 A:ASN51 3.5 25.6 1.0
CG A:PHE138 3.9 25.0 1.0
CD2 A:LEU107 4.0 31.8 1.0
CB A:PHE138 4.0 22.2 1.0
C12 A:4CD901 4.0 23.8 1.0
C16 A:4CD901 4.1 23.3 1.0
CE1 A:PHE138 4.1 25.2 1.0
CD1 A:LEU107 4.5 28.6 1.0
CG A:ASN51 4.5 27.0 1.0
C17 A:4CD901 4.6 22.5 1.0
CB A:ASN51 4.6 22.6 1.0
CG A:LEU107 4.7 28.4 1.0
C9 A:4CD901 4.8 28.2 1.0
C8 A:4CD901 4.8 27.7 1.0
CD2 A:PHE138 4.9 26.3 1.0
C7 A:4CD901 4.9 29.1 1.0
C10 A:4CD901 4.9 27.5 1.0
C6 A:4CD901 5.0 26.6 1.0
C5 A:4CD901 5.0 26.4 1.0

Reference:

P.P.Kung, B.Huang, G.Zhang, J.Z.Zhou, J.Wang, J.A.Digits, J.Skaptason, S.Yamazaki, D.Neul, M.Zientek, J.Elleraas, P.Mehta, M.J.Yin, M.J.Hickey, K.S.Gajiwala, C.Rodgers, J.F.Davies, M.R.Gehring. Dihydroxyphenylisoindoline Amides As Orally Bioavailable Inhibitors of the Heat Shock Protein 90 (HSP90) Molecular Chaperone. J.Med.Chem. V. 53 499 2010.
ISSN: ISSN 0022-2623
PubMed: 19908836
DOI: 10.1021/JM901209Q
Page generated: Sat Jul 20 22:28:50 2024

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