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Chlorine in PDB 3kma: Crystal Structure of Vset Under Condition A

Protein crystallography data

The structure of Crystal Structure of Vset Under Condition A, PDB code: 3kma was solved by H.Wei, M.M.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.60
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.403, 60.403, 102.417, 90.00, 90.00, 120.00
R / Rfree (%) 23.4 / 26.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Vset Under Condition A (pdb code 3kma). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Vset Under Condition A, PDB code: 3kma:

Chlorine binding site 1 out of 1 in 3kma

Go back to Chlorine Binding Sites List in 3kma
Chlorine binding site 1 out of 1 in the Crystal Structure of Vset Under Condition A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Vset Under Condition A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl123

b:16.9
occ:1.00
O B:HOH128 3.0 19.6 1.0
O A:HOH127 3.1 17.7 1.0
N B:GLY44 3.2 17.0 1.0
N A:GLY44 3.2 16.2 1.0
CE3 B:TRP43 3.8 13.9 1.0
CA B:TRP43 3.9 15.0 1.0
CE3 A:TRP43 3.9 13.6 1.0
CA A:TRP43 3.9 14.9 1.0
C B:TRP43 4.0 14.7 1.0
C A:TRP43 4.1 15.6 1.0
CA B:GLY44 4.1 16.6 1.0
CA A:GLY44 4.1 15.7 1.0
CB B:TRP43 4.3 14.0 1.0
CB A:TRP43 4.4 14.4 1.0
O B:ASP42 4.5 15.4 1.0
CB A:ALA46 4.5 15.2 1.0
O A:ASP42 4.5 15.8 1.0
C B:GLY44 4.6 16.4 1.0
CB B:ALA46 4.6 15.3 1.0
O B:GLY44 4.6 16.5 1.0
C A:GLY44 4.6 15.2 1.0
O A:GLY44 4.6 16.4 1.0
CZ3 B:TRP43 4.6 13.6 1.0
CD2 B:TRP43 4.7 14.6 1.0
CZ3 A:TRP43 4.7 13.9 1.0
CD2 A:TRP43 4.7 13.1 1.0
CG B:TRP43 4.9 15.1 1.0
CG A:TRP43 4.9 15.1 1.0
CD1 B:LEU47 5.0 17.8 1.0

Reference:

H.Wei, M.M.Zhou. Dimerization of A Viral Set Protein Endows Its Function. Proc.Natl.Acad.Sci.Usa V. 107 18433 2010.
ISSN: ISSN 0027-8424
PubMed: 20937900
DOI: 10.1073/PNAS.1009911107
Page generated: Sat Dec 12 09:51:19 2020

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