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Chlorine in PDB 3kqo: Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine

Enzymatic activity of Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine

All present enzymatic activity of Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine:
2.1.1.28;

Protein crystallography data

The structure of Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine, PDB code: 3kqo was solved by N.Drinkwater, J.L.Martin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.13 / 2.40
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 94.267, 94.267, 188.956, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 27.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine (pdb code 3kqo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine, PDB code: 3kqo:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3kqo

Go back to Chlorine Binding Sites List in 3kqo
Chlorine binding site 1 out of 2 in the Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl290

b:48.5
occ:1.00
CL01 A:ES4290 0.0 48.5 1.0
C02 A:ES4290 1.8 43.5 1.0
N03 A:ES4290 2.7 45.4 1.0
C10 A:ES4290 2.8 39.5 1.0
N09 A:ES4290 3.2 41.2 1.0
CG2 A:VAL53 3.7 36.2 1.0
O A:HOH2329 3.9 37.6 1.0
CG1 A:VAL53 3.9 20.2 1.0
NZ A:LYS57 3.9 32.2 1.0
CG2 A:VAL272 4.0 30.5 1.0
C04 A:ES4290 4.0 46.2 1.0
C06 A:ES4290 4.0 44.8 1.0
CE A:MET258 4.2 62.1 1.0
CZ A:PHE182 4.2 38.2 1.0
OD1 A:ASN39 4.3 38.2 1.0
CE2 A:PHE182 4.4 33.2 1.0
CB A:VAL53 4.4 34.1 1.0
NH1 A:ARG44 4.5 25.6 1.0
N05 A:ES4290 4.5 48.0 1.0
C08 A:ES4290 4.5 41.9 1.0
CE A:LYS57 4.6 38.1 1.0
CD A:ARG44 4.8 31.1 1.0
SD A:MET258 4.8 38.2 1.0
N07 A:ES4290 4.9 44.4 1.0
CD A:LYS57 5.0 42.5 1.0

Chlorine binding site 2 out of 2 in 3kqo

Go back to Chlorine Binding Sites List in 3kqo
Chlorine binding site 2 out of 2 in the Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Hpnmt in Complex Adohcy and 6-Chloropurine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl290

b:41.3
occ:1.00
CL01 B:ES4290 0.0 41.3 1.0
C02 B:ES4290 1.8 43.9 1.0
N03 B:ES4290 2.7 49.6 1.0
C10 B:ES4290 2.8 39.0 1.0
N09 B:ES4290 3.2 38.9 1.0
CG2 B:VAL53 3.6 28.0 1.0
CE B:LYS57 3.7 31.3 1.0
CE B:MET258 3.9 33.5 1.0
O B:HOH2045 3.9 41.8 1.0
NZ B:LYS57 3.9 35.5 1.0
CG2 B:VAL272 3.9 28.6 1.0
CG1 B:VAL53 4.0 22.7 1.0
C04 B:ES4290 4.0 46.4 1.0
C06 B:ES4290 4.0 39.6 1.0
CZ B:PHE182 4.3 38.4 1.0
CB B:VAL53 4.4 30.9 1.0
CE2 B:PHE182 4.4 37.1 1.0
OD1 B:ASN39 4.5 43.1 1.0
N05 B:ES4290 4.5 42.7 1.0
C08 B:ES4290 4.6 36.4 1.0
NH1 B:ARG44 4.6 22.6 1.0
CD B:ARG44 4.7 31.3 1.0
SD B:MET258 4.9 42.6 1.0
N07 B:ES4290 4.9 40.2 1.0

Reference:

N.Drinkwater, H.Vu, K.M.Lovell, K.R.Criscione, B.M.Collins, T.E.Prisinzano, S.A.Poulsen, M.J.Mcleish, G.L.Grunewald, J.L.Martin. Fragment-Based Screening By X-Ray Crystallography, Ms and Isothermal Titration Calorimetry to Identify Pnmt (Phenylethanolamine N-Methyltransferase) Inhibitors. Biochem.J. V. 431 51 2010.
ISSN: ISSN 0264-6021
PubMed: 20642456
DOI: 10.1042/BJ20100651
Page generated: Sat Jul 20 22:47:00 2024

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