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Chlorine in PDB 3kzw: Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col

Enzymatic activity of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col

All present enzymatic activity of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col:
3.4.11.1;

Protein crystallography data

The structure of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col, PDB code: 3kzw was solved by J.Hattne, I.Dubrovska, A.Halavaty, G.Minasov, P.Scott, L.Shuvalova, J.Winsor, Z.Otwinowski, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.62 / 2.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 143.383, 154.733, 340.101, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 24

Other elements in 3kzw:

The structure of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col also contains other interesting chemical elements:

Sodium (Na) 19 atoms

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 67;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col (pdb code 3kzw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 67 binding sites of Chlorine where determined in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col, PDB code: 3kzw:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 67 in 3kzw

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Chlorine binding site 1 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


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Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl492

b:31.7
occ:1.00
 N A:LEU79 3.2 2.7 1.0
N A:HIS23 3.5 11.7 1.0
CG A:LEU79 3.6 2.7 1.0
CB A:LEU79 3.6 2.7 1.0
CB A:PRO21 3.7 9.4 1.0
O A:HIS23 3.8 12.6 1.0
N A:GLU22 3.8 10.3 1.0
CD1 A:LEU79 3.8 2.7 1.0
CG A:GLN26 3.9 16.9 1.0
O A:GLY77 3.9 2.6 1.0
CA A:ASN78 4.0 2.7 1.0
CA A:LEU79 4.0 2.7 1.0
CB A:GLN26 4.0 16.5 1.0
C A:ASN78 4.1 2.7 1.0
OD1 A:ASN78 4.2 2.8 1.0
CB A:HIS23 4.2 12.1 1.0
CA A:HIS23 4.2 12.2 1.0
CB A:GLU22 4.3 10.9 1.0
CA A:GLU22 4.4 10.9 1.0
C A:HIS23 4.4 12.6 1.0
C A:GLU22 4.4 11.2 1.0
CD2 A:HIS23 4.4 11.9 1.0
C A:PRO21 4.5 9.8 1.0
CG A:ASN78 4.6 2.7 1.0
CA A:PRO21 4.6 9.4 1.0
CG A:PRO21 4.7 9.3 1.0
CG A:HIS23 4.7 12.0 1.0
C A:GLY77 4.8 2.6 1.0
N A:ASN78 4.9 2.6 1.0
CB A:ASN78 4.9 2.7 1.0
CD A:GLN26 5.0 17.5 1.0
CD2 A:LEU79 5.0 2.7 1.0

Chlorine binding site 2 out of 67 in 3kzw

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Chlorine binding site 2 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl493

b:41.3
occ:1.00
 O A:HOH605 3.7 10.0 1.0
OG1 A:THR328 3.8 2.7 1.0
O A:VAL326 4.2 2.6 1.0
N A:THR328 4.7 2.7 1.0
CE1 B:TYR141 4.9 2.6 1.0
CA A:PHE327 4.9 2.6 1.0
CB A:THR328 5.0 2.6 1.0
CG2 B:VAL189 5.0 2.6 1.0

Chlorine binding site 3 out of 67 in 3kzw

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Chlorine binding site 3 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl494

b:57.9
occ:1.00
 OE1 A:GLU333 4.2 2.9 1.0
CD A:GLU333 4.5 2.9 1.0
O A:HIS447 4.6 2.7 1.0
NE2 A:HIS447 4.6 2.6 1.0
OE2 A:GLU333 4.6 2.8 1.0
CE1 A:PHE353 4.9 2.6 1.0

Chlorine binding site 4 out of 67 in 3kzw

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Chlorine binding site 4 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl495

b:17.4
occ:1.00
 NE A:ARG345 2.9 2.6 1.0
N A:ARG345 3.2 2.6 1.0
N A:GLY344 3.4 2.7 1.0
NH2 A:ARG345 3.5 2.5 1.0
C A:ALA342 3.5 2.7 1.0
CA A:ALA342 3.5 2.6 1.0
CD2 A:LEU369 3.6 2.7 1.0
CZ A:ARG345 3.6 2.6 1.0
CG A:ARG345 3.7 2.6 1.0
CA A:GLY344 3.7 2.7 1.0
O A:ALA342 3.8 2.7 1.0
CB A:ARG345 3.9 2.6 1.0
CD A:ARG345 3.9 2.6 1.0
N A:GLU343 3.9 2.7 1.0
C A:GLY344 3.9 2.7 1.0
CB A:ALA342 4.0 2.6 1.0
CA A:ARG345 4.1 2.6 1.0
C A:GLU343 4.3 2.8 1.0
CD1 A:LEU369 4.4 2.7 1.0
CG A:LEU369 4.4 2.8 1.0
O A:LEU369 4.5 2.8 1.0
O A:ASP341 4.6 2.7 1.0
CB A:LEU369 4.6 2.7 1.0
CA A:GLU343 4.7 2.7 1.0
N A:ALA342 4.8 2.6 1.0
CA A:LEU369 4.8 2.7 1.0
C A:LEU369 4.9 2.7 1.0
NH1 A:ARG345 4.9 2.6 1.0

Chlorine binding site 5 out of 67 in 3kzw

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Chlorine binding site 5 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl496

b:49.7
occ:1.00
 CZ A:TYR358 4.3 2.7 1.0
CE2 A:TYR358 4.4 2.7 1.0
CE1 A:TYR358 4.5 2.6 1.0
OH A:TYR358 4.6 2.8 1.0
CB A:GLN357 4.6 2.7 1.0
CD2 A:TYR358 4.7 2.7 1.0
CD1 A:TYR358 4.8 2.7 1.0
O A:GLN357 4.9 2.7 1.0
CG A:TYR358 4.9 2.7 1.0
C A:GLN357 5.0 2.7 1.0

Chlorine binding site 6 out of 67 in 3kzw

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Chlorine binding site 6 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl492

b:58.3
occ:1.00
 O B:HOH522 3.1 2.0 1.0
N B:VAL54 3.4 2.7 1.0
CG2 B:VAL54 3.5 2.7 1.0
CA B:LYS53 3.6 2.6 1.0
CA B:GLY77 3.8 2.6 1.0
C B:LYS53 4.0 2.7 1.0
O B:SER52 4.1 2.8 1.0
CB B:VAL54 4.3 2.7 1.0
CG B:LYS53 4.3 2.7 1.0
CA B:VAL54 4.4 2.6 1.0
N B:LYS53 4.4 2.6 1.0
CB B:LYS53 4.5 2.6 1.0
C B:SER52 4.6 2.6 1.0
N B:GLY77 4.7 2.6 1.0
OE1 B:GLU22 4.9 12.3 1.0
C B:GLY77 5.0 2.6 1.0

Chlorine binding site 7 out of 67 in 3kzw

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Chlorine binding site 7 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl493

b:60.8
occ:1.00
 N B:HIS23 3.3 11.7 1.0
N B:LEU79 3.4 2.7 1.0
O B:HIS23 3.7 12.6 1.0
N B:GLU22 3.8 10.3 1.0
CG B:GLN26 3.8 16.9 1.0
CB B:LEU79 3.9 2.7 1.0
CB B:PRO21 3.9 9.4 1.0
CG B:LEU79 3.9 2.7 1.0
CB B:HIS23 3.9 12.1 1.0
CA B:ASN78 4.0 2.7 1.0
O B:GLY77 4.0 2.6 1.0
OD1 B:ASN78 4.0 2.7 1.0
CA B:HIS23 4.0 12.2 1.0
CB B:GLU22 4.0 10.9 1.0
CD2 B:HIS23 4.1 11.9 1.0
CB B:GLN26 4.1 16.5 1.0
C B:ASN78 4.2 2.7 1.0
CA B:GLU22 4.2 10.9 1.0
C B:GLU22 4.2 11.2 1.0
CD1 B:LEU79 4.2 2.6 1.0
CA B:LEU79 4.2 2.7 1.0
C B:HIS23 4.3 12.6 1.0
CG B:HIS23 4.4 12.0 1.0
CG B:ASN78 4.4 2.7 1.0
C B:PRO21 4.5 9.8 1.0
CA B:PRO21 4.7 9.5 1.0
CB B:ASN78 4.8 2.7 1.0
C B:GLY77 4.8 2.6 1.0
CG B:PRO21 4.8 9.2 1.0
N B:ASN78 4.9 2.7 1.0
CD B:GLN26 4.9 17.5 1.0

Chlorine binding site 8 out of 67 in 3kzw

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Chlorine binding site 8 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl494

b:44.8
occ:1.00
 OG1 B:THR328 3.5 2.7 1.0
O B:VAL326 4.0 2.6 1.0
N B:THR328 4.5 2.7 1.0
CE1 C:TYR141 4.6 2.7 1.0
CA B:PHE327 4.7 2.6 1.0
CB B:THR328 4.8 2.6 1.0
C B:PHE327 4.8 2.7 1.0
C B:VAL326 4.8 2.6 1.0
CD1 C:TYR141 4.9 2.6 1.0

Chlorine binding site 9 out of 67 in 3kzw

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Chlorine binding site 9 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl495

b:52.9
occ:1.00
 OE1 B:GLU333 3.9 2.8 1.0
CD B:GLU333 4.2 2.8 1.0
OE2 B:GLU333 4.4 2.9 1.0
NE2 B:HIS447 4.6 2.6 1.0
CB B:SER331 4.7 2.7 1.0
CE1 B:PHE353 4.7 2.6 1.0
O B:HIS447 4.9 2.7 1.0

Chlorine binding site 10 out of 67 in 3kzw

Go back to Chlorine Binding Sites List in 3kzw
Chlorine binding site 10 out of 67 in the Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl496

b:25.6
occ:1.00
 NE B:ARG345 3.0 2.6 1.0
N B:ARG345 3.1 2.6 1.0
N B:GLY344 3.3 2.7 1.0
C B:ALA342 3.5 2.7 1.0
CA B:ALA342 3.5 2.6 1.0
NH2 B:ARG345 3.6 2.5 1.0
CD2 B:LEU369 3.6 2.7 1.0
CA B:GLY344 3.7 2.7 1.0
CZ B:ARG345 3.7 2.6 1.0
CG B:ARG345 3.8 2.6 1.0
O B:ALA342 3.8 2.7 1.0
O B:HOH679 3.8 16.7 1.0
N B:GLU343 3.8 2.7 1.0
C B:GLY344 3.9 2.7 1.0
CB B:ARG345 3.9 2.6 1.0
CD B:ARG345 3.9 2.6 1.0
CB B:ALA342 4.1 2.5 1.0
CA B:ARG345 4.1 2.6 1.0
C B:GLU343 4.3 2.8 1.0
CG B:LEU369 4.4 2.8 1.0
CD1 B:LEU369 4.4 2.7 1.0
O B:ASP341 4.6 2.7 1.0
O B:LEU369 4.6 2.9 1.0
CB B:LEU369 4.7 2.7 1.0
CA B:GLU343 4.7 2.7 1.0
N B:ALA342 4.8 2.6 1.0
CA B:LEU369 4.8 2.7 1.0
C B:LEU369 4.9 2.7 1.0

Reference:

J.Hattne, I.Dubrovska, A.Halavaty, G.Minasov, P.Scott, L.Shuvalova, J.Winsor, Z.Otwinowski, Center For Structural Genomics Of Infectiousdiseases (Csgid). N/A N/A.
Page generated: Sat Jul 20 22:56:55 2024

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