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Chlorine in PDB 3l01: Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi

Enzymatic activity of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi

All present enzymatic activity of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi:
2.4.1.21;

Protein crystallography data

The structure of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi, PDB code: 3l01 was solved by A.Diaz, C.Martinez-Pons, I.Fita, J.C.Ferrer, J.J.Guinovart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.91 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 103.604, 119.017, 141.101, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 22.8

Other elements in 3l01:

The structure of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi also contains other interesting chemical elements:

Potassium (K) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi (pdb code 3l01). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi, PDB code: 3l01:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 3l01

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Chlorine binding site 1 out of 6 in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl5700

b:31.8
occ:1.00
 N A:ARG55 3.2 30.4 1.0
CA A:ILE54 3.6 29.9 1.0
CB A:ILE54 3.7 29.7 1.0
C A:ILE54 3.9 30.9 1.0
CG2 A:ILE54 3.9 29.3 1.0
NH2 A:ARG105 3.9 33.4 1.0
NE A:ARG105 4.0 34.8 1.0
O A:ARG55 4.1 30.3 1.0
CA A:ARG55 4.1 31.1 1.0
CB A:ARG55 4.1 31.7 1.0
NE A:ARG55 4.3 45.5 1.0
CZ A:ARG105 4.5 34.1 1.0
C A:ARG55 4.6 30.5 1.0
CB A:ARG105 4.7 25.4 1.0
O A:LYS53 4.8 33.8 1.0
CD A:ARG55 4.9 40.2 1.0
N A:ILE54 5.0 31.7 1.0

Chlorine binding site 2 out of 6 in 3l01

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Chlorine binding site 2 out of 6 in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl5703

b:46.0
occ:1.00
 N A:GLY17 3.7 23.5 1.0
CA A:GLY16 4.0 23.7 1.0
C A:GLY16 4.3 24.1 1.0
CA A:GLY17 4.7 22.5 1.0

Chlorine binding site 3 out of 6 in 3l01

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Chlorine binding site 3 out of 6 in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl5704

b:25.4
occ:1.00
 NE1 A:TRP202 3.7 29.4 1.0
NE A:ARG206 3.9 31.5 1.0
NH2 A:ARG206 4.0 33.5 1.0
OE2 A:GLU209 4.3 46.0 1.0
CD1 A:TRP202 4.3 28.8 1.0
CZ A:ARG206 4.4 33.0 1.0
CE2 A:TRP202 4.8 27.7 1.0

Chlorine binding site 4 out of 6 in 3l01

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Chlorine binding site 4 out of 6 in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl5701

b:36.1
occ:1.00
 N B:ARG55 3.5 33.8 1.0
NE B:ARG105 3.5 39.4 1.0
NH2 B:ARG105 3.5 36.5 1.0
O B:ARG55 3.8 34.1 1.0
CB B:ILE54 3.9 33.8 1.0
CZ B:ARG105 4.0 37.7 1.0
CA B:ILE54 4.0 31.2 1.0
CG2 B:ILE54 4.2 32.4 1.0
C B:ILE54 4.3 34.6 1.0
CA B:ARG55 4.4 34.3 1.0
CB B:ARG55 4.4 34.6 1.0
CB B:ARG105 4.4 28.4 1.0
C B:ARG55 4.5 34.7 1.0
CG B:ARG105 4.6 31.8 1.0
CD B:ARG105 4.6 34.0 1.0
NE B:ARG55 4.9 49.8 1.0

Chlorine binding site 5 out of 6 in 3l01

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Chlorine binding site 5 out of 6 in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl5702

b:54.9
occ:1.00
 N B:GLY17 3.5 23.2 1.0
CA B:GLY16 3.9 21.3 1.0
C B:GLY16 4.2 23.9 1.0
CA B:GLY17 4.5 20.2 1.0

Chlorine binding site 6 out of 6 in 3l01

Go back to Chlorine Binding Sites List in 3l01
Chlorine binding site 6 out of 6 in the Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Monomeric Glycogen Synthase From Pyrococcus Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl5705

b:32.4
occ:1.00
 CG1 B:ILE199 4.2 26.1 1.0
CD1 B:ILE199 4.2 28.0 1.0
CD2 B:LEU198 4.3 22.3 1.0
CG B:ARG195 4.6 27.3 1.0
CD B:ARG195 4.7 26.6 1.0

Reference:

A.Diaz, C.Martinez-Pons, I.Fita, J.C.Ferrer, J.J.Guinovart. Processivity and Subcellular Localization of Glycogen Synthase Depend on A Non-Catalytic High Affinity Glycogen-Binding Site. J.Biol.Chem. V. 286 18505 2011.
ISSN: ISSN 0021-9258
PubMed: 21464127
DOI: 10.1074/JBC.M111.236109
Page generated: Fri Jul 11 07:10:01 2025

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