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Chlorine in PDB 3l50: The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg)

Protein crystallography data

The structure of The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg), PDB code: 3l50 was solved by E.Ugochukwu, E.Pilka, E.Krysztofinska, E.Hapka, T.Krojer, J.Muniz, M.Vollmar, A.C.W.Pike, F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, K.L.Kavanagh, U.Oppermann, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.21 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.870, 78.150, 57.300, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 25.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg) (pdb code 3l50). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg), PDB code: 3l50:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3l50

Go back to Chlorine Binding Sites List in 3l50
Chlorine binding site 1 out of 2 in the The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1

b:20.0
occ:0.50
ND2 B:ASN109 3.3 10.0 1.0
NZ B:LYS108 3.5 27.5 1.0
CB B:VAL120 3.8 8.1 1.0
CE B:LYS108 3.8 11.8 1.0
CG2 B:VAL120 3.8 10.2 1.0
CD B:LYS108 3.8 11.9 1.0
CG B:ASN109 4.3 10.5 1.0
CG1 B:VAL120 4.3 6.7 1.0
OE2 B:GLU122 4.3 32.5 1.0
OD1 B:ASN109 4.5 6.5 1.0
CG B:LYS108 4.5 17.8 1.0

Chlorine binding site 2 out of 2 in 3l50

Go back to Chlorine Binding Sites List in 3l50
Chlorine binding site 2 out of 2 in the The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2

b:30.7
occ:1.00
NZ B:LYS137 2.8 23.6 1.0
N B:GLU122 3.0 12.5 1.0
O B:HOH143 3.3 18.8 1.0
O B:VAL120 3.5 16.8 1.0
CE B:LYS137 3.5 15.4 1.0
CA B:PHE121 3.8 8.9 1.0
C B:PHE121 3.8 12.2 1.0
CB B:GLU122 3.9 10.8 1.0
CA B:GLU122 4.0 15.7 1.0
O B:GLU122 4.1 11.9 1.0
CG B:GLU122 4.2 26.7 1.0
C B:VAL120 4.4 17.3 1.0
C B:GLU122 4.5 7.5 1.0
N B:PHE121 4.6 10.3 1.0
CB B:PHE121 4.9 12.1 1.0
CD B:LYS137 4.9 15.8 1.0

Reference:

E.Ugochukwu, E.Pilka, E.Krysztofinska, E.Hapka, T.Krojer, J.Muniz, M.Vollmar, A.C.W.Pike, F.Von Delft, K.L.Kavanagh, U.Oppermann. The Crystal Structure of Human Glia Maturation Factor, Gamma (Gmfg) To Be Published.
Page generated: Sat Dec 12 09:52:27 2020

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