Chlorine in PDB 3lid: Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8

The structure of Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8, PDB code: 3lid was solved by Z.Zhang, W.A.Hendrickson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.81 / 1.76
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	74.102, 79.444, 123.142, 90.00, 90.00, 90.00
R / Rfree (%)	18.2 / 22.2

The binding sites of Chlorine atom in the Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8 (pdb code 3lid). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8, PDB code: 3lid:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl350 b:17.2 occ:1.00 O A:HOH545 3.1 20.7 1.0 O A:HOH336 3.2 18.2 1.0 N A:GLY167 3.2 18.4 1.0 NH1 A:ARG141 3.3 15.4 1.0 NZ A:LYS138 3.3 16.5 1.0 CD A:ARG141 3.7 19.2 1.0 N A:LYS166 3.7 16.5 1.0 CB A:ARG164 3.8 15.6 1.0 O A:ARG164 3.8 16.1 1.0 CA A:GLY167 3.9 18.7 1.0 CD A:LYS138 3.9 14.8 1.0 CG A:ARG141 4.0 16.5 1.0 C A:ARG164 4.0 16.3 1.0 CE A:LYS138 4.0 15.0 1.0 C A:LYS166 4.2 18.2 1.0 CA A:LYS166 4.2 18.0 1.0 C A:ASP165 4.3 15.6 1.0 CZ A:ARG141 4.3 17.8 1.0 N A:ASP165 4.3 16.3 1.0 NE A:ARG141 4.5 17.1 1.0 CA A:ASP165 4.5 16.4 1.0 CA A:ARG164 4.6 15.0 1.0 O A:HOH372 4.7 37.7 1.0 O A:HOH364 4.9 25.7 1.0 O A:HOH332 4.9 36.6 1.0 O2 A:PO4321 5.0 14.9 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Extracellular Domain of the Putative Histidine Kinase VPHK1S-Z8 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl351 b:18.3 occ:1.00 O B:HOH332 3.1 17.7 1.0 O B:HOH478 3.2 19.9 1.0 N B:GLY167 3.2 19.4 1.0 NH1 B:ARG141 3.2 17.7 1.0 NZ B:LYS138 3.3 15.3 1.0 N B:LYS166 3.7 15.9 1.0 CD B:ARG141 3.7 18.1 1.0 CA B:GLY167 3.8 20.7 1.0 CD B:LYS138 3.9 12.7 1.0 O B:ARG164 3.9 16.3 1.0 CB B:ARG164 3.9 15.2 1.0 CG B:ARG141 4.0 16.1 1.0 C B:ARG164 4.1 16.2 1.0 CE B:LYS138 4.1 13.8 1.0 C B:LYS166 4.2 19.7 1.0 C B:ASP165 4.2 16.9 1.0 CZ B:ARG141 4.2 17.0 1.0 CA B:LYS166 4.2 17.9 1.0 N B:ASP165 4.3 15.6 1.0 CA B:ASP165 4.3 15.6 1.0 NE B:ARG141 4.4 19.0 1.0 O B:HOH323 4.6 39.2 1.0 CA B:ARG164 4.7 13.6 1.0 O B:HOH580 4.8 34.5 1.0 O B:HOH367 4.9 33.0 1.0 O1 B:PO4321 4.9 16.0 1.0 C B:GLY167 4.9 18.9 1.0

Z.Zhang, W.A.Hendrickson. Structural Characterization of the Predominant Family of Histidine Kinase Sensor Domains. J.Mol.Biol. V. 400 335 2010.
ISSN: ISSN 0022-2836
PubMed: 20435045
DOI: 10.1016/J.JMB.2010.04.049