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Chlorine in PDB 3ll1: Monomeric Griffithsin with A Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association

Protein crystallography data

The structure of Monomeric Griffithsin with A Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association, PDB code: 3ll1 was solved by T.Moulaei, A.Wlodawer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 0.97
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 55.400, 55.400, 61.800, 90.00, 90.00, 120.00
R / Rfree (%) 15.2 / 16.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Monomeric Griffithsin with A Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association (pdb code 3ll1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Monomeric Griffithsin with A Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association, PDB code: 3ll1:

Chlorine binding site 1 out of 1 in 3ll1

Go back to Chlorine Binding Sites List in 3ll1
Chlorine binding site 1 out of 1 in the Monomeric Griffithsin with A Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Monomeric Griffithsin with A Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl121

b:10.2
occ:1.00
OD2 A:ASP70 3.1 11.3 1.0
N A:TYR68 3.4 8.6 1.0
N A:ASP67 3.7 9.2 1.0
OD1 A:ASP70 3.8 11.5 1.0
CG A:ASP70 3.8 9.8 1.0
CB A:TYR68 3.9 8.5 1.0
O A:TYR68 4.0 9.1 1.0
CD2 A:TYR68 4.1 8.9 1.0
CA A:TYR68 4.1 8.1 1.0
C A:ASP67 4.3 8.8 1.0
CA A:ASP67 4.3 9.3 1.0
CB A:ASP67 4.4 10.6 1.0
C A:TYR68 4.4 8.4 1.0
CG A:TYR68 4.5 8.4 1.0
C A:GLY66 4.5 9.4 1.0
CA A:GLY66 4.5 9.8 1.0
N A:GLY66 4.5 9.7 1.0

Reference:

T.Moulaei, S.R.Shenoy, B.Giomarelli, C.Thomas, J.B.Mcmahon, Z.Dauter, B.R.O'keefe, A.Wlodawer. Monomerization of Viral Entry Inhibitor Griffithsin Elucidates the Relationship Between Multivalent Binding to Carbohydrates and Anti-Hiv Activity. Structure V. 18 1104 2010.
ISSN: ISSN 0969-2126
PubMed: 20826337
DOI: 10.1016/J.STR.2010.05.016
Page generated: Sat Dec 12 09:53:17 2020

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