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Chlorine in PDB 3llx: Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution, PDB code: 3llx was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.50
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 109.557, 109.557, 173.321, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 15.8

Other elements in 3llx:

The structure of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution (pdb code 3llx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution, PDB code: 3llx:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 3llx

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Chlorine binding site 1 out of 6 in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl377

b:16.6
occ:1.00
O A:HOH581 3.1 8.6 1.0
NE2 A:HIS338 3.1 10.4 1.0
O A:HOH744 3.2 19.9 1.0
CG A:LYS302 3.6 8.0 1.0
CE1 A:HIS338 3.8 10.9 1.0
CD A:LYS302 4.0 9.0 1.0
CE1 A:PHE334 4.1 12.0 1.0
CB A:LYS302 4.1 7.1 1.0
CD1 A:LEU308 4.1 8.5 1.0
CD2 A:LEU340 4.1 6.5 1.0
CD2 A:HIS338 4.3 9.9 1.0
CE A:LYS302 4.3 10.5 1.0
CA A:LYS302 4.3 6.1 1.0
CD2 A:LEU308 4.5 9.0 1.0
CD1 A:PHE334 4.6 10.9 1.0
CG A:LEU308 4.8 6.7 1.0
CZ A:PHE334 4.9 11.2 1.0
O A:HOH497 4.9 39.6 1.0
O A:HOH717 5.0 18.3 1.0
O A:HOH858 5.0 27.4 1.0

Chlorine binding site 2 out of 6 in 3llx

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Chlorine binding site 2 out of 6 in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl378

b:21.1
occ:1.00
OG1 A:THR180 3.2 12.3 1.0
N A:ASN179 3.3 12.5 1.0
N A:THR180 3.5 12.1 1.0
CA A:CYS178 3.7 11.9 1.0
CA A:GLY183 3.7 8.7 1.0
CB A:CYS178 3.7 12.1 1.0
OD1 A:ASN179 3.9 16.8 1.0
C A:CYS178 4.0 12.3 1.0
CB A:THR180 4.0 13.7 1.0
CG2 A:THR180 4.1 14.8 1.0
CA A:THR180 4.2 13.0 1.0
O A:THR180 4.2 11.1 1.0
SG A:CYS178 4.3 16.2 1.0
C A:ASN179 4.3 13.2 1.0
CA A:ASN179 4.3 13.1 1.0
N A:GLY183 4.4 9.8 1.0
C A:GLY183 4.4 9.9 1.0
O A:HOH872 4.5 28.5 1.0
C A:THR180 4.7 11.8 1.0
CG A:ASN179 4.7 18.2 1.0
N A:LEU184 4.8 8.5 1.0
O A:HOH554 4.9 49.1 1.0
N A:CYS178 5.0 11.6 1.0

Chlorine binding site 3 out of 6 in 3llx

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Chlorine binding site 3 out of 6 in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl379

b:14.2
occ:1.00
O A:HOH756 3.1 20.8 1.0
N A:TRS383 3.5 16.6 0.4
C3 A:TRS383 3.7 17.1 0.4
C1 A:TRS383 3.7 17.6 0.4
C1 A:TRS383 3.7 10.0 0.6
CE1 A:HIS346 3.8 7.3 1.0
N A:TRS383 3.8 5.9 0.6
C A:TRS383 3.8 17.1 0.4
C3 A:TRS383 3.9 10.0 0.6
O1 A:TRS383 3.9 16.3 0.4
C A:TRS383 4.0 9.0 0.6
O1 A:TRS383 4.2 5.7 0.6
ND1 A:HIS346 4.6 7.6 1.0
NE2 A:HIS346 4.7 8.0 1.0
O A:HOH522 4.8 42.0 1.0
O3 A:TRS383 4.8 15.9 0.4
O A:HOH663 4.9 14.5 1.0
O3 A:TRS383 4.9 9.4 0.6

Chlorine binding site 4 out of 6 in 3llx

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Chlorine binding site 4 out of 6 in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl380

b:22.8
occ:1.00
O A:HOH849 2.9 27.1 1.0
N A:ILE115 3.2 7.5 1.0
NZ A:LYS153 3.2 19.6 1.0
CB A:ASN114 3.5 6.7 0.5
OD1 A:ASN114 3.6 10.6 0.5
CA A:ASN114 3.6 6.2 0.5
CD A:LYS153 3.6 17.0 1.0
CA A:ASN114 3.7 6.6 0.5
CG A:ASN114 3.7 7.6 0.5
CE A:LYS153 3.7 18.9 1.0
CG2 A:ILE115 3.7 10.3 1.0
C A:ASN114 3.9 6.9 0.5
C A:ASN114 3.9 6.7 0.5
CB A:ILE115 4.0 10.0 1.0
ND2 A:ASN114 4.1 8.1 0.5
CA A:ILE115 4.2 8.5 1.0
CB A:ASN114 4.2 7.3 0.5
CD1 A:ILE157 4.3 9.8 1.0
O A:ASP113 4.5 6.6 1.0
CG A:LYS153 4.7 14.3 1.0
N A:ASN114 4.8 5.8 0.5
O A:HOH896 4.8 30.2 1.0
N A:ASN114 4.8 5.5 0.5
O A:HOH710 4.9 17.8 1.0
CG A:ASN114 4.9 8.1 0.5

Chlorine binding site 5 out of 6 in 3llx

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Chlorine binding site 5 out of 6 in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl381

b:45.6
occ:1.00
O A:HOH807 2.6 23.6 1.0
NH1 A:ARG341 3.0 10.8 1.0
O A:HOH475 3.1 37.6 1.0
O A:ASP304 3.5 14.9 1.0
CD2 A:LEU360 3.7 13.1 1.0
CB A:ALA4 3.9 25.6 1.0
CZ A:ARG341 4.0 10.2 1.0
C A:ASP304 4.0 12.2 1.0
NH2 A:ARG341 4.0 11.7 1.0
O A:HOH437 4.2 34.9 1.0
CA A:ALA4 4.3 24.2 1.0
O A:ILE303 4.4 10.8 0.4
CA A:ASP304 4.5 11.6 1.0
O A:ILE303 4.6 13.4 0.6
OD2 A:ASP19 4.7 13.4 1.0
N A:GLY305 4.7 10.8 1.0
CD1 A:ILE8 4.9 6.8 0.5
N A:ALA4 4.9 29.0 1.0
CA A:GLY305 5.0 10.7 1.0

Chlorine binding site 6 out of 6 in 3llx

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Chlorine binding site 6 out of 6 in the Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of An Ala Racemase-Like Protein (IL1761) From Idiomarina Loihiensis at 1.50 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl382

b:37.1
occ:1.00
N A:SER286 3.0 9.7 1.0
OG A:SER286 3.5 15.7 1.0
CA A:ASP285 3.6 8.6 1.0
C A:ASP285 3.8 8.8 1.0
CA A:SER286 3.9 9.7 1.0
O A:ARG284 4.0 10.5 0.5
OD1 A:ASP285 4.0 10.9 1.0
CG A:ASP285 4.0 9.2 1.0
C A:SER286 4.1 12.2 1.0
N A:GLY287 4.1 11.0 1.0
O A:ARG284 4.2 7.7 0.5
CB A:SER286 4.3 12.6 1.0
OD2 A:ASP285 4.3 11.0 1.0
CB A:ASP285 4.4 8.6 1.0
N A:ASP285 4.7 9.8 1.0
O A:SER286 4.7 13.9 1.0
C A:ARG284 4.7 9.7 0.5
C A:ARG284 4.8 9.1 0.5
CA A:GLY287 4.9 11.8 1.0
O A:ASP285 5.0 9.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 07:29:20 2025

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