Atomistry » Chlorine » PDB 3lnr-3lya » 3loo
Atomistry »
  Chlorine »
    PDB 3lnr-3lya »
      3loo »

Chlorine in PDB 3loo: Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate

Enzymatic activity of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate

All present enzymatic activity of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate:
2.7.1.20;

Protein crystallography data

The structure of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate, PDB code: 3loo was solved by M.-C.Ho, M.B.Cassera, S.C.Almo, V.L.Schramm, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.381, 76.813, 140.515, 90.00, 92.12, 90.00
R / Rfree (%) 19.8 / 24.8

Other elements in 3loo:

The structure of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate (pdb code 3loo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate, PDB code: 3loo:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3loo

Go back to Chlorine Binding Sites List in 3loo
Chlorine binding site 1 out of 3 in the Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl351

b:22.3
occ:1.00
 OG A:SER166 3.0 21.0 1.0
O A:HOH369 3.2 19.8 1.0
N A:ASN14 3.3 20.5 1.0
N A:VAL66 3.4 19.3 1.0
C2A A:B4P349 3.4 23.1 1.0
N A:SER65 3.6 22.6 1.0
CB A:SER65 3.6 21.6 1.0
CG2 A:VAL66 3.7 17.9 1.0
CB A:SER166 3.7 18.8 1.0
CA A:GLY13 3.8 22.7 1.0
CA A:SER65 4.0 21.8 1.0
CB A:VAL66 4.0 19.8 1.0
N3A A:B4P349 4.0 21.2 1.0
O A:ASN14 4.0 20.3 1.0
C A:GLY13 4.1 22.2 1.0
CB A:PHE168 4.1 21.2 1.0
C A:SER65 4.2 20.4 1.0
CA A:ASN14 4.2 21.4 1.0
CA A:VAL66 4.3 20.0 1.0
CB A:ASN14 4.3 21.1 1.0
N1A A:B4P349 4.3 21.1 1.0
CD2 A:PHE168 4.3 19.7 1.0
C A:GLY64 4.3 24.1 1.0
CG A:ASN14 4.5 25.6 1.0
ND2 A:ASN14 4.5 20.6 1.0
C A:ASN14 4.5 21.1 1.0
OG A:SER65 4.7 26.3 1.0
CA A:GLY64 4.7 24.5 1.0
CG A:PHE168 4.7 21.3 1.0

Chlorine binding site 2 out of 3 in 3loo

Go back to Chlorine Binding Sites List in 3loo
Chlorine binding site 2 out of 3 in the Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl351

b:30.3
occ:1.00
 OG B:SER166 3.1 31.3 1.0
O B:HOH360 3.1 26.7 1.0
N B:VAL66 3.2 29.3 1.0
N B:ASN14 3.2 31.7 1.0
C2A B:B4P349 3.4 29.4 1.0
N B:SER65 3.5 29.6 1.0
CG2 B:VAL66 3.6 29.9 1.0
CA B:GLY13 3.6 32.0 1.0
CB B:SER166 3.6 30.7 1.0
CB B:SER65 3.7 29.6 1.0
CB B:VAL66 3.8 29.2 1.0
CA B:SER65 3.9 29.4 1.0
C B:GLY13 4.0 32.3 1.0
N3A B:B4P349 4.1 30.6 1.0
C B:SER65 4.1 29.4 1.0
CA B:VAL66 4.1 29.5 1.0
O B:ASN14 4.2 31.5 1.0
CA B:ASN14 4.2 32.0 1.0
CB B:ASN14 4.3 32.0 1.0
CB B:PHE168 4.3 30.8 1.0
N1A B:B4P349 4.3 32.0 1.0
C B:GLY64 4.4 29.4 1.0
CD2 B:PHE168 4.4 29.7 1.0
CG B:ASN14 4.5 32.6 1.0
C B:ASN14 4.6 32.1 1.0
ND2 B:ASN14 4.6 34.2 1.0
OG B:SER65 4.8 31.1 1.0
CA B:GLY64 4.9 30.2 1.0
CG B:PHE168 4.9 30.6 1.0
O B:LEU12 5.0 32.1 1.0
N B:GLY13 5.0 32.3 1.0

Chlorine binding site 3 out of 3 in 3loo

Go back to Chlorine Binding Sites List in 3loo
Chlorine binding site 3 out of 3 in the Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Anopheles Gambiae Adenosine Kinase in Complex with P1,P4-Di(Adenosine-5) Tetraphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl351

b:30.1
occ:1.00
 OG C:SER166 3.0 29.5 1.0
O C:HOH360 3.1 27.7 1.0
N C:ASN14 3.3 27.2 1.0
N C:VAL66 3.4 31.4 1.0
C2A C:B4P349 3.5 30.6 1.0
N C:SER65 3.6 33.0 1.0
CA C:GLY13 3.7 28.8 1.0
CB C:SER166 3.7 28.5 1.0
CG2 C:VAL66 3.7 28.0 1.0
CB C:SER65 3.9 33.0 1.0
CB C:VAL66 3.9 31.4 1.0
O C:ASN14 4.0 27.8 1.0
C C:GLY13 4.0 28.6 1.0
CA C:SER65 4.0 32.7 1.0
N3A C:B4P349 4.1 28.9 1.0
C C:SER65 4.2 32.3 1.0
CB C:PHE168 4.2 28.4 1.0
CA C:VAL66 4.2 30.3 1.0
CA C:ASN14 4.3 27.5 1.0
CD2 C:PHE168 4.3 27.6 1.0
C C:GLY64 4.3 32.9 1.0
CB C:ASN14 4.3 26.3 1.0
N1A C:B4P349 4.4 28.7 1.0
C C:ASN14 4.5 27.4 1.0
CG C:ASN14 4.5 27.2 1.0
ND2 C:ASN14 4.6 25.7 1.0
CA C:GLY64 4.7 32.6 1.0
OG C:SER65 4.8 34.5 1.0
CG C:PHE168 4.8 29.0 1.0
O C:LEU12 5.0 31.2 1.0
N C:GLY13 5.0 30.1 1.0

Reference:

M.B.Cassera, M.C.Ho, E.F.Merino, E.S.Burgos, A.Rinaldo-Matthis, S.C.Almo, V.L.Schramm. A High-Affinity Adenosine Kinase From Anopheles Gambiae. Biochemistry V. 50 1885 2011.
ISSN: ISSN 0006-2960
PubMed: 21247194
DOI: 10.1021/BI101921W
Page generated: Sat Jul 20 23:34:35 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy