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Chlorine in PDB 3m6w: Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus in Space Group P21212 in Complex with S-Adenosyl-L- Methionine

Protein crystallography data

The structure of Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus in Space Group P21212 in Complex with S-Adenosyl-L- Methionine, PDB code: 3m6w was solved by H.Demirci, H.G.L.Larsen, T.Hansen, A.Rasmussen, A.Cadambi, S.T.Gregory, F.Kirpekar, G.Jogl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.60 / 1.30
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 89.661, 109.047, 50.982, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 19.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus in Space Group P21212 in Complex with S-Adenosyl-L- Methionine (pdb code 3m6w). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus in Space Group P21212 in Complex with S-Adenosyl-L- Methionine, PDB code: 3m6w:

Chlorine binding site 1 out of 1 in 3m6w

Go back to Chlorine Binding Sites List in 3m6w
Chlorine binding site 1 out of 1 in the Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus in Space Group P21212 in Complex with S-Adenosyl-L- Methionine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus in Space Group P21212 in Complex with S-Adenosyl-L- Methionine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl466

b:16.9
occ:1.00
O A:HOH1260 3.0 28.8 1.0
O A:HOH542 3.1 37.9 1.0
O A:HOH990 3.2 20.5 1.0
N A:GLY73 3.2 9.7 1.0
N A:PRO72 3.5 11.8 1.0
CA A:ARG71 3.6 12.2 1.0
CD A:PRO72 3.6 13.3 1.0
C A:ARG71 3.6 13.2 1.0
CA A:GLY73 3.8 11.4 1.0
CD A:PRO74 3.8 11.2 1.0
CB A:ARG71 4.1 12.5 1.0
C A:PRO72 4.2 10.1 1.0
O A:ARG71 4.4 12.5 1.0
CA A:PRO72 4.4 11.4 1.0
O A:ALA70 4.5 13.3 1.0
O A:HOH751 4.5 48.4 1.0
CG A:ARG71 4.7 14.5 1.0
O A:HOH1313 4.8 41.4 1.0
N A:PRO74 4.8 11.0 1.0
CD1 A:ILE85 4.8 12.7 1.0
N A:ARG71 4.8 12.8 1.0
CG A:PRO72 4.8 20.0 1.0
O A:HOH972 4.8 23.6 1.0
C A:GLY73 4.9 10.8 1.0
OH A:TYR66 4.9 16.9 1.0
CG A:PRO74 5.0 13.3 1.0

Reference:

H.Demirci, L.H.Larsen, T.Hansen, A.Rasmussen, A.Cadambi, S.T.Gregory, F.Kirpekar, G.Jogl. Multi-Site-Specific 16S Rrna Methyltransferase Rsmf From Thermus Thermophilus. Rna V. 16 1584 2010.
ISSN: ISSN 1355-8382
PubMed: 20558545
DOI: 10.1261/RNA.2088310
Page generated: Sat Dec 12 09:54:30 2020

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