Atomistry » Chlorine » PDB 3m98-3mlb » 3mae
Atomistry »
  Chlorine »
    PDB 3m98-3mlb »
      3mae »

Chlorine in PDB 3mae: Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365

Protein crystallography data

The structure of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365, PDB code: 3mae was solved by Y.Patskovsky, R.Toro, M.Gilmore, J.M.Sauder, S.K.Burley, S.C.Almo, New Yorksgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 110.221, 173.008, 131.061, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 23.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 (pdb code 3mae). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 9 binding sites of Chlorine where determined in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365, PDB code: 3mae:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Chlorine binding site 1 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 1 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:54.3
occ:1.00
 N A:HIS211 3.2 35.4 1.0
O A:ILE209 3.4 42.4 1.0
O A:HOH69 3.4 65.9 1.0
ND1 A:HIS211 3.6 35.8 1.0
NZ A:LYS206 3.6 48.5 1.0
CB A:HIS211 3.6 31.2 1.0
CD A:LYS206 3.7 45.8 1.0
O A:LYS206 3.8 48.2 1.0
CE C:LYS206 3.8 38.4 1.0
O2 A:GOL427 3.8 73.9 1.0
CG A:HIS211 3.9 33.1 1.0
CD C:LYS206 4.0 42.2 1.0
CA A:HIS211 4.0 33.5 1.0
NZ C:LYS206 4.1 47.5 1.0
CE A:LYS206 4.1 42.4 1.0
CA A:PRO210 4.1 34.7 1.0
CG C:LYS206 4.1 37.8 1.0
C A:PRO210 4.1 35.2 1.0
C A:ILE209 4.4 40.1 1.0
C2 A:GOL427 4.5 79.3 1.0
O A:HIS211 4.5 33.2 1.0
CB C:LYS206 4.6 36.6 1.0
O B:HOH73 4.6 47.5 1.0
CE1 A:HIS211 4.6 35.4 1.0
C A:LYS206 4.7 44.4 1.0
N A:PRO210 4.8 35.7 1.0
C A:HIS211 4.8 34.5 1.0
CA A:LYS206 4.9 41.4 1.0
C3 A:GOL427 5.0 80.5 1.0
CG A:LYS206 5.0 41.4 1.0

Chlorine binding site 2 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 2 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl428

b:69.1
occ:1.00
 NE2 A:GLN357 3.4 46.9 1.0
OG A:SER344 3.4 53.2 1.0
CL B:CL426 4.1 70.0 1.0
O A:MET345 4.2 39.4 1.0
O B:TRP213 4.3 33.7 1.0
CB B:ALA212 4.4 29.1 1.0
CD A:GLN357 4.5 44.8 1.0
CA A:GLY346 4.6 36.8 1.0
CG2 A:THR336 4.6 40.0 1.0
C A:MET345 4.7 40.5 1.0
CA B:GLY391 4.7 43.8 1.0
O1 A:GOL426 4.7 77.6 1.0
OE1 A:GLN357 4.7 60.2 1.0
CB A:SER344 4.8 36.6 1.0
N B:TRP213 4.8 33.3 1.0
N B:GLY391 4.8 43.5 1.0
CG B:MET214 4.9 48.6 1.0
N A:GLY346 4.9 37.5 1.0
ND2 A:ASN334 4.9 55.0 1.0
NE2 B:HIS386 5.0 52.2 1.0

Chlorine binding site 3 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 3 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl430

b:66.2
occ:1.00
 N A:GLY391 3.2 32.9 1.0
ND2 C:ASN334 3.3 53.6 1.0
O2 C:GOL425 3.4 76.8 1.0
CA A:GLY391 3.8 29.2 1.0
CL C:CL427 3.9 69.6 1.0
NE2 A:HIS386 3.9 54.2 1.0
CB A:ASP390 4.1 42.9 1.0
C A:ASP390 4.3 37.0 1.0
CE1 A:HIS386 4.3 53.1 1.0
CA A:ASP390 4.3 40.7 1.0
CD1 C:LEU289 4.4 86.0 1.0
O3 C:GOL425 4.4 71.5 1.0
CG C:ASN334 4.5 51.1 1.0
C3 C:GOL425 4.5 78.4 1.0
C2 C:GOL425 4.6 77.5 1.0
CE2 C:PHE339 4.9 56.1 1.0
OD1 C:ASN334 4.9 67.1 1.0
CD2 C:LEU289 4.9 88.0 1.0
C A:GLY391 5.0 34.3 1.0

Chlorine binding site 4 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 4 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1

b:56.5
occ:1.00
 NZ A:LYS206 3.0 48.5 1.0
O B:HOH72 3.1 53.2 1.0
N B:HIS211 3.1 38.0 1.0
O B:ILE209 3.2 40.4 1.0
O2 A:GOL427 3.4 73.9 1.0
ND1 B:HIS211 3.5 32.8 1.0
NZ B:LYS206 3.6 44.5 1.0
CB B:HIS211 3.6 34.1 1.0
CD B:LYS206 3.8 42.0 1.0
CG B:HIS211 3.9 36.1 1.0
CE A:LYS206 3.9 42.4 1.0
CA B:PRO210 3.9 39.8 1.0
CA B:HIS211 3.9 35.0 1.0
C B:PRO210 4.0 38.1 1.0
O B:LYS206 4.0 49.7 1.0
CG A:LYS206 4.0 41.4 1.0
CD A:LYS206 4.2 45.8 1.0
CE B:LYS206 4.3 44.1 1.0
C B:ILE209 4.3 41.5 1.0
O B:HIS211 4.4 35.7 1.0
O B:HOH73 4.4 47.5 1.0
CE1 B:HIS211 4.5 33.0 1.0
CB A:LYS206 4.6 39.0 1.0
N B:PRO210 4.6 41.7 1.0
C B:HIS211 4.7 34.8 1.0
C2 A:GOL427 4.7 79.3 1.0
O3 A:GOL427 4.9 79.7 1.0
C B:LYS206 5.0 47.3 1.0
CD2 B:HIS211 5.0 31.6 1.0

Chlorine binding site 5 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 5 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl426

b:70.0
occ:1.00
 N B:GLY391 3.2 43.5 1.0
ND2 A:ASN334 3.5 55.0 1.0
NE2 B:HIS386 3.7 52.2 1.0
O2 A:GOL426 3.8 71.7 1.0
CA B:GLY391 3.9 43.8 1.0
CB B:ASP390 4.0 48.8 1.0
CL A:CL428 4.1 69.1 1.0
C B:ASP390 4.2 44.4 1.0
CD1 A:LEU289 4.2 95.9 1.0
CA B:ASP390 4.3 45.7 1.0
CE1 B:HIS386 4.3 54.4 1.0
O1 A:GOL426 4.3 77.6 1.0
CG A:ASN334 4.7 52.7 1.0
C1 A:GOL426 4.7 75.9 1.0
CD2 A:LEU289 4.8 86.6 1.0
C2 A:GOL426 4.8 74.5 1.0
CD2 B:HIS386 4.8 47.2 1.0
CE2 A:PHE339 4.9 62.3 1.0

Chlorine binding site 6 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 6 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl427

b:74.2
occ:1.00
 NE2 B:GLN357 3.4 46.7 1.0
OG B:SER344 3.5 44.9 0.5
CL B:CL428 3.9 68.2 1.0
O3 B:GOL425 4.0 67.9 1.0
O B:MET345 4.2 39.8 1.0
CB C:ALA212 4.4 30.8 1.0
CA B:GLY346 4.4 35.8 1.0
O C:TRP213 4.4 31.1 1.0
CG2 B:THR336 4.5 43.8 1.0
C3 B:GOL425 4.5 77.7 1.0
NE2 C:HIS386 4.6 44.9 1.0
CD B:GLN357 4.7 50.5 1.0
C B:MET345 4.7 38.6 1.0
CB B:SER344 4.8 30.9 0.5
CA C:GLY391 4.8 39.6 1.0
CB B:SER344 4.8 33.9 0.5
N C:GLY391 4.8 42.3 1.0
N B:GLY346 4.8 34.1 1.0
ND2 B:ASN334 4.9 63.3 1.0

Chlorine binding site 7 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 7 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl428

b:68.2
occ:1.00
 N C:GLY391 3.4 42.3 1.0
ND2 B:ASN334 3.5 63.3 1.0
NE2 C:HIS386 3.6 44.9 1.0
C1 B:GOL425 3.7 75.6 1.0
CL B:CL427 3.9 74.2 1.0
CE1 C:HIS386 3.9 54.9 1.0
CB C:ASP390 4.0 45.6 1.0
CD1 B:LEU289 4.1 89.0 1.0
CA C:GLY391 4.2 39.6 1.0
C3 B:GOL425 4.2 77.7 1.0
CA C:ASP390 4.3 45.3 1.0
C C:ASP390 4.3 43.3 1.0
O1 B:GOL425 4.4 77.7 1.0
O3 B:GOL425 4.4 67.9 1.0
C2 B:GOL425 4.4 77.3 1.0
CD2 B:LEU289 4.5 91.5 1.0
CG B:ASN334 4.6 56.2 1.0
CD2 C:HIS386 4.9 45.5 1.0
OD1 B:ASN334 5.0 63.7 1.0
CG B:LEU289 5.0 92.0 1.0

Chlorine binding site 8 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 8 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1

b:53.6
occ:1.00
 N C:HIS211 3.2 33.3 1.0
NZ C:LYS206 3.3 47.5 1.0
O C:ILE209 3.3 45.0 1.0
O1 A:GOL427 3.4 75.4 1.0
ND1 C:HIS211 3.6 32.4 1.0
CD B:LYS206 3.6 42.0 1.0
CB C:HIS211 3.6 27.4 1.0
CE B:LYS206 3.7 44.1 1.0
CD C:LYS206 3.8 42.2 1.0
NZ B:LYS206 3.8 44.5 1.0
CG C:HIS211 4.0 32.7 1.0
CA C:HIS211 4.0 31.5 1.0
O C:LYS206 4.0 44.0 1.0
CA C:PRO210 4.0 37.8 1.0
O2 A:GOL427 4.1 73.9 1.0
C1 A:GOL427 4.1 78.0 1.0
CG B:LYS206 4.1 45.1 1.0
C C:PRO210 4.1 34.4 1.0
CE C:LYS206 4.1 38.4 1.0
C2 A:GOL427 4.2 79.3 1.0
O B:HOH73 4.3 47.5 1.0
C C:ILE209 4.4 40.9 1.0
O C:HIS211 4.4 36.1 1.0
CE1 C:HIS211 4.6 39.3 1.0
CB B:LYS206 4.7 43.5 1.0
C C:HIS211 4.7 33.8 1.0
N C:PRO210 4.7 40.7 1.0
C C:LYS206 5.0 43.9 1.0

Chlorine binding site 9 out of 9 in 3mae

Go back to Chlorine Binding Sites List in 3mae
Chlorine binding site 9 out of 9 in the Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of Probable Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl427

b:69.6
occ:1.00
 NE2 C:GLN357 3.4 46.6 1.0
CL A:CL430 3.9 66.2 1.0
O3 C:GOL425 3.9 71.5 1.0
O C:MET345 4.1 38.2 1.0
CB A:ALA212 4.3 28.4 1.0
O A:TRP213 4.4 29.1 1.0
CA C:GLY346 4.5 32.8 1.0
CG2 C:THR336 4.6 39.5 1.0
CD C:GLN357 4.7 47.5 1.0
CA A:GLY391 4.7 29.2 1.0
NE2 A:HIS386 4.7 54.2 1.0
ND2 C:ASN334 4.7 53.6 1.0
CB C:SER344 4.7 32.3 1.0
C C:MET345 4.7 35.3 1.0
C3 C:GOL425 4.7 78.4 1.0
N A:GLY391 4.7 32.9 1.0
CD2 A:HIS386 4.9 50.8 1.0
N C:GLY346 5.0 34.7 1.0

Reference:

Y.Patskovsky, R.Toro, M.Gilmore, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of A Catalytic Domain of Dihydrolipoamide Acetyltransferase From Listeria Monocytogenes 4B F2365 To Be Published.
Page generated: Sun Jul 21 00:04:31 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy