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Chlorine in PDB 3mbj: Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form)

Protein crystallography data

The structure of Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form), PDB code: 3mbj was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.59 / 2.10
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 161.627, 161.627, 76.138, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 21

Other elements in 3mbj:

The structure of Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form) also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form) (pdb code 3mbj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form), PDB code: 3mbj:

Chlorine binding site 1 out of 1 in 3mbj

Go back to Chlorine Binding Sites List in 3mbj
Chlorine binding site 1 out of 1 in the Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Phosphomethylpyrimidine Kinase (BT_4458) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (Rhombohedral Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl294

b:69.0
occ:1.00
N A:ALA3 3.5 30.1 1.0
CB A:TYR2 3.7 35.4 1.0
NZ A:LYS5 3.9 19.7 1.0
CA A:TYR2 3.9 35.2 1.0
CD1 A:TYR2 4.1 31.6 1.0
C A:TYR2 4.2 32.9 1.0
CB A:ALA3 4.2 26.7 1.0
CG A:TYR2 4.4 33.8 1.0
CA A:ALA3 4.4 28.7 1.0
O A:ALA3 5.0 27.3 1.0
CE A:LYS5 5.0 19.4 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 09:54:44 2020

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