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Chlorine in PDB 3mla: Banadd in Complex with Inhibitor 1_02

Enzymatic activity of Banadd in Complex with Inhibitor 1_02

All present enzymatic activity of Banadd in Complex with Inhibitor 1_02:
2.7.7.18;

Protein crystallography data

The structure of Banadd in Complex with Inhibitor 1_02, PDB code: 3mla was solved by N.Huang, Y.Eyobo, H.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.71 / 1.75
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 88.586, 97.498, 44.280, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 23

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Banadd in Complex with Inhibitor 1_02 (pdb code 3mla). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Banadd in Complex with Inhibitor 1_02, PDB code: 3mla:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3mla

Go back to Chlorine Binding Sites List in 3mla
Chlorine binding site 1 out of 2 in the Banadd in Complex with Inhibitor 1_02


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Banadd in Complex with Inhibitor 1_02 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl190

b:35.8
occ:0.53
CLAF A:JJZ190 0.0 35.8 0.5
CAG A:JJZ190 1.7 28.8 0.5
CAA A:JJZ190 2.7 33.2 0.5
CAH A:JJZ190 2.7 19.2 0.5
O A:HOH345 3.0 46.0 1.0
CG2 A:VAL131 3.0 34.9 1.0
N A:GLY106 3.3 23.1 1.0
CA A:GLY106 3.3 25.7 1.0
C A:ILE105 3.5 18.3 1.0
O A:ILE105 3.7 20.5 1.0
CAB A:JJZ190 4.0 34.3 0.5
CAI A:JJZ190 4.0 23.8 0.5
CD1 A:ILE21 4.0 31.3 1.0
CG2 A:ILE104 4.2 19.2 1.0
CG2 A:ILE21 4.3 22.2 1.0
CB A:VAL131 4.3 34.6 1.0
CA A:ILE105 4.3 17.6 1.0
CAC A:JJZ190 4.5 34.3 0.5
CG1 A:VAL131 4.5 37.6 1.0
O A:HOH350 4.7 47.7 1.0
N A:ILE105 4.7 16.1 1.0
C A:GLY106 4.7 25.9 1.0
CG1 A:ILE21 4.9 23.7 1.0

Chlorine binding site 2 out of 2 in 3mla

Go back to Chlorine Binding Sites List in 3mla
Chlorine binding site 2 out of 2 in the Banadd in Complex with Inhibitor 1_02


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Banadd in Complex with Inhibitor 1_02 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl190

b:0.2
occ:0.47
CLAF A:JJZ190 0.0 0.2 0.5
CAG A:JJZ190 1.7 33.4 0.5
CAA A:JJZ190 2.7 35.6 0.5
CAH A:JJZ190 2.7 29.3 0.5
ND1 B:HIS18 2.9 29.2 1.0
O B:HOH285 3.1 45.7 1.0
CD1 B:ILE7 3.2 21.6 1.0
O B:HOH319 3.4 29.1 1.0
CD1 B:ILE21 3.7 26.9 1.0
CE1 B:HIS18 3.8 21.0 1.0
CA B:HIS18 3.9 21.0 1.0
CG B:HIS18 3.9 19.1 1.0
CG1 B:ILE7 3.9 20.9 1.0
CAB A:JJZ190 4.0 37.7 0.5
CAI A:JJZ190 4.0 25.5 0.5
CB B:HIS18 4.1 19.0 1.0
O B:HOH265 4.2 50.4 1.0
CAC A:JJZ190 4.5 29.8 0.5
CB B:ILE21 4.7 16.9 1.0
N B:HIS18 4.7 16.7 1.0
CG1 B:ILE21 4.8 19.3 1.0
O B:HIS18 4.8 19.8 1.0
CG2 B:ILE21 4.8 22.6 1.0
O B:GLY17 4.9 18.9 1.0
C B:HIS18 4.9 22.7 1.0
NE2 B:HIS18 4.9 24.5 1.0
CE2 B:PHE11 5.0 24.6 1.0

Reference:

N.Huang, R.Kolhatkar, Y.Eyobo, L.Sorci, I.Rodionova, A.L.Osterman, A.D.Mackerell, H.Zhang. Complexes of Bacterial Nicotinate Mononucleotide Adenylyltransferase with Inhibitors: Implication For Structure-Based Drug Design and Improvement. J.Med.Chem. V. 53 5229 2010.
ISSN: ISSN 0022-2623
PubMed: 20578699
DOI: 10.1021/JM100377F
Page generated: Sun Jul 21 00:13:42 2024

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