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Chlorine in PDB 3mmx: Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3

Enzymatic activity of Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3

All present enzymatic activity of Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3:
2.7.7.18;

Protein crystallography data

The structure of Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3, PDB code: 3mmx was solved by N.Huang, H.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.93 / 2.55
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 295.151, 46.446, 114.952, 90.00, 91.42, 90.00
R / Rfree (%) 22.1 / 26.3

Other elements in 3mmx:

The structure of Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3 also contains other interesting chemical elements:

Potassium (K) 9 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3 (pdb code 3mmx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3, PDB code: 3mmx:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3mmx

Go back to Chlorine Binding Sites List in 3mmx
Chlorine binding site 1 out of 2 in the Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl191

b:60.2
occ:1.00
CLAE B:KJZ191 0.0 60.2 1.0
CAZ B:KJZ191 1.7 54.4 1.0
CAL B:KJZ191 2.7 52.7 1.0
CBB B:KJZ191 2.7 51.7 1.0
NAV B:KJZ191 3.1 50.6 1.0
CAX B:KJZ191 3.3 45.8 1.0
OAB B:KJZ191 3.7 44.9 1.0
CG C:LYS115 3.7 59.5 1.0
CD1 B:TYR84 3.9 37.3 1.0
O C:LYS115 3.9 42.5 1.0
CAG B:KJZ191 4.0 52.3 1.0
CAN B:KJZ191 4.0 49.5 1.0
CE1 B:TYR84 4.2 38.0 1.0
CB C:LYS115 4.2 47.8 1.0
CAR B:KJZ191 4.3 43.8 1.0
CA C:LYS115 4.3 49.3 1.0
O B:SER83 4.3 46.4 1.0
CAH B:KJZ191 4.5 51.9 1.0
C C:LYS115 4.5 42.5 1.0
CA B:TYR84 4.8 37.7 1.0
CD C:LYS115 4.9 62.3 1.0

Chlorine binding site 2 out of 2 in 3mmx

Go back to Chlorine Binding Sites List in 3mmx
Chlorine binding site 2 out of 2 in the Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Bacillus Anthracis Nadd (Banadd) in Complex with Compound 1_02_3 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl191

b:80.9
occ:1.00
CLAE D:KJZ191 0.0 80.9 1.0
CAZ D:KJZ191 1.7 74.7 1.0
CAL D:KJZ191 2.7 74.7 1.0
CBB D:KJZ191 2.7 72.5 1.0
NAV D:KJZ191 3.1 68.6 1.0
CAX D:KJZ191 3.5 62.9 1.0
O D:LYS115 3.9 49.0 1.0
CG D:LYS115 3.9 56.5 1.0
CD2 A:TYR84 4.0 50.1 1.0
CAG D:KJZ191 4.0 74.1 1.0
CAN D:KJZ191 4.1 72.5 1.0
CE2 A:TYR84 4.1 50.4 1.0
OAB D:KJZ191 4.1 61.5 1.0
CB D:LYS115 4.3 50.0 1.0
CAR D:KJZ191 4.3 58.6 1.0
CA D:LYS115 4.3 53.4 1.0
O D:HOH207 4.4 38.2 1.0
C D:LYS115 4.5 49.9 1.0
CAH D:KJZ191 4.6 73.4 1.0

Reference:

N.Huang, R.Kolhatkar, Y.Eyobo, L.Sorci, I.Rodionova, A.L.Osterman, A.D.Mackerell, H.Zhang. Complexes of Bacterial Nicotinate Mononucleotide Adenylyltransferase with Inhibitors: Implication For Structure-Based Drug Design and Improvement. J.Med.Chem. V. 53 5229 2010.
ISSN: ISSN 0022-2623
PubMed: 20578699
DOI: 10.1021/JM100377F
Page generated: Sun Jul 21 00:15:55 2024

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