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Chlorine in PDB 3mvx: X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red

Enzymatic activity of X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red

All present enzymatic activity of X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red:
3.6.3.24;

Protein crystallography data

The structure of X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red, PDB code: 3mvx was solved by C.Cavazza, C.Bochot, P.Rousselot-Pailley, P.Carpentier, M.V.Cherrier, L.Martin, C.Marchi-Delapierre, J.C.Fontecilla-Camps, S.Menage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.30 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.967, 94.616, 125.025, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 20.4

Other elements in 3mvx:

The structure of X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red (pdb code 3mvx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red, PDB code: 3mvx:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3mvx

Go back to Chlorine Binding Sites List in 3mvx
Chlorine binding site 1 out of 2 in the X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl512

b:53.4
occ:1.00
O B:HOH808 2.7 23.1 1.0
OG A:SER233 3.0 13.5 1.0
CB A:SER233 3.7 11.7 1.0
O B:HOH761 3.9 17.0 1.0
CA B:GLY304 4.0 9.8 1.0
CA A:ALA230 4.0 11.0 1.0
CB A:ALA230 4.2 12.3 1.0
ND2 B:ASN302 4.3 13.7 1.0
O A:ALA230 4.4 11.6 1.0
N B:GLY304 4.4 10.3 1.0
OD1 B:ASN302 4.6 15.8 1.0
CE2 A:PHE229 4.7 14.7 1.0
C A:ALA230 4.7 10.8 1.0
CG B:ASN302 4.9 13.8 1.0
CD2 A:PHE229 4.9 10.0 1.0

Chlorine binding site 2 out of 2 in 3mvx

Go back to Chlorine Binding Sites List in 3mvx
Chlorine binding site 2 out of 2 in the X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Structure of the Reduced Nika/1 Hybrid, Nika/1-Red within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl506

b:39.5
occ:1.00
O B:HOH816 2.7 20.6 1.0
N B:PHE28 3.0 13.6 1.0
O B:HOH668 3.2 22.5 1.0
N B:MET27 3.5 10.8 1.0
CB B:MET27 3.6 14.2 1.0
CD1 B:PHE28 3.6 14.1 1.0
CB B:PHE28 3.8 15.1 1.0
CA B:MET27 3.8 14.3 1.0
C B:MET27 3.8 14.2 1.0
O B:THR490 3.8 14.7 1.0
CZ2 B:TRP10 3.9 17.0 1.0
CA B:PHE28 3.9 13.0 1.0
C B:GLN26 4.2 12.0 1.0
CG B:PHE28 4.2 12.8 1.0
CG B:MET27 4.4 15.8 1.0
CH2 B:TRP10 4.4 19.0 1.0
CB B:GLN26 4.6 11.3 1.0
CA B:GLN26 4.6 11.3 1.0
CB B:THR490 4.7 14.7 1.0
NE2 B:GLN26 4.7 11.9 1.0
CE1 B:PHE28 4.7 13.1 1.0
CE2 B:TRP10 4.8 14.0 1.0
C B:THR490 4.8 13.2 1.0
O B:MET27 4.9 12.8 1.0
O B:HOH691 4.9 24.3 1.0
SD B:MET27 5.0 17.8 1.0
O B:GLN26 5.0 12.4 1.0

Reference:

C.Cavazza, C.Bochot, P.Rousselot-Pailley, P.Carpentier, M.V.Cherrier, L.Martin, C.Marchi-Delapierre, J.C.Fontecilla-Camps, S.Menage. Crystallographic Snapshots of the Reaction of Aromatic C-H with O(2) Catalysed By A Protein-Bound Iron Complex Nat.Chem. V. 2 1069 2010.
ISSN: ISSN 1755-4330
PubMed: 21107372
DOI: 10.1038/NCHEM.841
Page generated: Sun Jul 21 00:24:42 2024

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