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Chlorine in PDB 3n3z: Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx

Enzymatic activity of Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx

All present enzymatic activity of Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx:
3.1.4.35;

Protein crystallography data

The structure of Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx, PDB code: 3n3z was solved by J.Hou, H.-B.Luo, Y.Chen, J.Xu, R.Zhao, L.Zou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.33 / 2.75
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 104.090, 104.090, 270.210, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 23

Other elements in 3n3z:

The structure of Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx (pdb code 3n3z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx, PDB code: 3n3z:

Chlorine binding site 1 out of 1 in 3n3z

Go back to Chlorine Binding Sites List in 3n3z
Chlorine binding site 1 out of 1 in the Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of PDE9A (E406A) Mutant in Complex with Ibmx within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl508

b:67.6
occ:1.00
NH2 B:ARG487 3.6 52.3 1.0
NH1 B:ARG487 3.7 52.3 1.0
CE2 B:TRP484 4.1 46.3 1.0
NE1 B:TRP484 4.1 46.5 1.0
CD2 B:TRP484 4.1 46.2 1.0
CZ B:ARG487 4.2 51.1 1.0
CD1 B:TRP484 4.2 47.0 1.0
CG B:TRP484 4.2 46.7 1.0
CZ2 B:TRP484 4.7 46.4 1.0
CE3 B:TRP484 4.7 46.0 1.0
CB B:TRP484 4.9 47.2 1.0

Reference:

J.Hou, H.-B.Luo, Y.Chen, J.Xu, R.Zhao, L.Zou. Crystal Structure of PDE9A (E406A) Mutation in Complex with Ibmx To Be Published.
Page generated: Sat Dec 12 09:56:21 2020

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