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Chlorine in PDB 3n5u: Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1

Enzymatic activity of Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1

All present enzymatic activity of Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1:
3.1.3.16;

Protein crystallography data

The structure of Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1, PDB code: 3n5u was solved by A.M.Hirschi, M.Cecchini, R.C.Steinhardt, F.A.Dick, S.M.Rubin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 83.00 / 3.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 92.946, 92.946, 192.381, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 26.1

Other elements in 3n5u:

The structure of Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1 also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1 (pdb code 3n5u). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1, PDB code: 3n5u:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3n5u

Go back to Chlorine Binding Sites List in 3n5u
Chlorine binding site 1 out of 2 in the Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:45.2
occ:1.00
MN A:MN1 3.0 29.6 1.0
MN A:MN2 3.2 27.0 1.0
NH2 A:ARG96 3.4 48.3 1.0
NH1 A:ARG221 3.4 41.4 1.0
NE2 A:HIS125 3.7 41.3 1.0
O A:HIS248 4.0 36.0 1.0
ND2 A:ASN124 4.1 35.0 1.0
OH A:TYR272 4.1 50.3 1.0
CD2 A:HIS125 4.1 41.5 1.0
OD2 A:ASP92 4.3 36.7 1.0
CE1 A:HIS248 4.3 39.0 1.0
ND1 A:HIS248 4.4 38.1 1.0
CZ A:ARG221 4.6 38.3 1.0
CZ A:ARG96 4.6 52.8 1.0
NE2 A:HIS66 4.7 39.0 1.0
OD1 A:ASN124 4.8 33.3 1.0
CE1 A:HIS125 4.9 42.5 1.0
CG A:ASN124 4.9 35.7 1.0

Chlorine binding site 2 out of 2 in 3n5u

Go back to Chlorine Binding Sites List in 3n5u
Chlorine binding site 2 out of 2 in the Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Rb C-Terminal Peptide Bound to the Catalytic Subunit of PP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2

b:39.4
occ:1.00
MN B:MN4 3.0 30.1 1.0
NE2 B:HIS125 3.1 42.6 1.0
ND2 B:ASN124 3.1 34.7 1.0
CD2 B:HIS125 3.4 41.4 1.0
NH2 B:ARG96 3.5 47.0 1.0
MN B:MN3 3.5 30.6 1.0
NH1 B:ARG221 3.6 42.4 1.0
CE1 B:HIS248 4.1 40.1 1.0
CG B:ASN124 4.1 36.1 1.0
OD2 B:ASP92 4.1 37.4 1.0
OD1 B:ASN124 4.2 33.9 1.0
CE1 B:HIS125 4.3 41.8 1.0
ND1 B:HIS248 4.3 38.4 1.0
O B:HIS248 4.6 37.2 1.0
OH B:TYR272 4.7 51.8 1.0
CG B:HIS125 4.8 36.8 1.0
CZ B:ARG96 4.8 52.4 1.0
CZ B:ARG221 4.8 40.0 1.0
NE2 B:HIS66 4.9 39.4 1.0

Reference:

A.Hirschi, M.Cecchini, R.C.Steinhardt, M.R.Schamber, F.A.Dick, S.M.Rubin. An Overlapping Kinase and Phosphatase Docking Site Regulates Activity of the Retinoblastoma Protein. Nat.Struct.Mol.Biol. V. 17 1051 2010.
ISSN: ISSN 1545-9993
PubMed: 20694007
DOI: 10.1038/NSMB.1868
Page generated: Sat Dec 12 09:56:32 2020

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