Chlorine in PDB 3nrc: Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Enzymatic activity of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
All present enzymatic activity of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan:
1.3.1.9;
Protein crystallography data
The structure of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan, PDB code: 3nrc
was solved by
S.Mehboob,
B.D.Santarsiero,
K.Truong,
M.E.Johnson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.81 /
2.10
|
Space group
|
P 21 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
123.080,
85.120,
51.760,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
18.6 /
24.2
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
(pdb code 3nrc). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan, PDB code: 3nrc:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 3nrc
Go back to
Chlorine Binding Sites List in 3nrc
Chlorine binding site 1 out
of 6 in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl262
b:29.5
occ:1.00
|
CL14
|
A:TCL262
|
0.0
|
29.5
|
1.0
|
C2
|
A:TCL262
|
1.7
|
34.9
|
1.0
|
C3
|
A:TCL262
|
2.7
|
33.5
|
1.0
|
C1
|
A:TCL262
|
2.7
|
31.5
|
1.0
|
O7N
|
A:NAD261
|
3.4
|
30.6
|
1.0
|
CZ
|
A:TYR146
|
3.6
|
31.2
|
1.0
|
CE1
|
A:TYR146
|
3.7
|
30.1
|
1.0
|
CE1
|
A:PHE203
|
3.7
|
41.5
|
1.0
|
OH
|
A:TYR146
|
3.8
|
36.8
|
1.0
|
CD1
|
A:PHE203
|
3.9
|
41.6
|
1.0
|
CE2
|
A:TYR146
|
4.0
|
30.3
|
1.0
|
C4
|
A:TCL262
|
4.0
|
31.2
|
1.0
|
C6
|
A:TCL262
|
4.0
|
29.4
|
1.0
|
CA
|
A:PRO191
|
4.1
|
35.0
|
1.0
|
CB
|
A:PRO191
|
4.1
|
35.4
|
1.0
|
C7N
|
A:NAD261
|
4.1
|
32.9
|
1.0
|
CD1
|
A:TYR146
|
4.2
|
28.4
|
1.0
|
C4N
|
A:NAD261
|
4.2
|
27.1
|
1.0
|
SD
|
A:MET206
|
4.2
|
60.3
|
1.0
|
CD2
|
A:TYR146
|
4.4
|
30.2
|
1.0
|
C3N
|
A:NAD261
|
4.5
|
29.0
|
1.0
|
C5
|
A:TCL262
|
4.5
|
32.6
|
1.0
|
CG
|
A:TYR146
|
4.6
|
26.4
|
1.0
|
N
|
A:PRO191
|
4.8
|
33.3
|
1.0
|
CE1
|
A:TYR156
|
4.9
|
31.7
|
1.0
|
CZ
|
A:PHE203
|
5.0
|
39.2
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 3nrc
Go back to
Chlorine Binding Sites List in 3nrc
Chlorine binding site 2 out
of 6 in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl262
b:39.0
occ:1.00
|
CL15
|
A:TCL262
|
0.0
|
39.0
|
1.0
|
C11
|
A:TCL262
|
1.7
|
34.3
|
1.0
|
C12
|
A:TCL262
|
2.7
|
35.0
|
1.0
|
C10
|
A:TCL262
|
2.7
|
33.7
|
1.0
|
O
|
A:ALA94
|
3.3
|
29.9
|
1.0
|
N
|
A:ALA94
|
3.5
|
29.3
|
1.0
|
CD1
|
A:LEU99
|
3.6
|
38.4
|
1.0
|
C13
|
A:TCL262
|
4.0
|
36.0
|
1.0
|
C9
|
A:TCL262
|
4.0
|
37.6
|
1.0
|
CA
|
A:PHE93
|
4.1
|
29.4
|
1.0
|
CE
|
A:MET159
|
4.2
|
31.4
|
1.0
|
C
|
A:ALA94
|
4.2
|
33.3
|
1.0
|
C
|
A:PHE93
|
4.3
|
29.3
|
1.0
|
CA
|
A:ALA94
|
4.4
|
31.2
|
1.0
|
CD1
|
A:PHE93
|
4.4
|
30.9
|
1.0
|
C8
|
A:TCL262
|
4.5
|
31.4
|
1.0
|
CB
|
A:ALA94
|
4.7
|
28.0
|
1.0
|
CG
|
A:LEU99
|
4.9
|
40.8
|
1.0
|
CG
|
A:PHE93
|
4.9
|
32.2
|
1.0
|
CE1
|
A:PHE93
|
4.9
|
31.1
|
1.0
|
O
|
A:ALA92
|
5.0
|
29.8
|
1.0
|
N
|
A:PHE93
|
5.0
|
28.0
|
1.0
|
CB
|
A:PHE93
|
5.0
|
30.3
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 3nrc
Go back to
Chlorine Binding Sites List in 3nrc
Chlorine binding site 3 out
of 6 in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl262
b:45.6
occ:1.00
|
CL16
|
A:TCL262
|
0.0
|
45.6
|
1.0
|
C9
|
A:TCL262
|
1.7
|
37.6
|
1.0
|
C10
|
A:TCL262
|
2.7
|
33.7
|
1.0
|
C8
|
A:TCL262
|
2.8
|
31.4
|
1.0
|
O7
|
A:TCL262
|
3.0
|
33.4
|
1.0
|
O
|
A:ALA92
|
3.5
|
29.8
|
1.0
|
CB
|
A:ALA196
|
3.5
|
36.7
|
1.0
|
C5B
|
A:NAD261
|
3.6
|
32.2
|
1.0
|
C3D
|
A:NAD261
|
3.6
|
26.5
|
1.0
|
O5D
|
A:NAD261
|
3.6
|
28.2
|
1.0
|
C2D
|
A:NAD261
|
3.7
|
28.6
|
1.0
|
CB
|
A:ALA92
|
3.8
|
27.9
|
1.0
|
O2D
|
A:NAD261
|
3.8
|
27.7
|
1.0
|
N
|
A:ALA92
|
3.9
|
30.5
|
1.0
|
C11
|
A:TCL262
|
4.0
|
34.3
|
1.0
|
C
|
A:ALA92
|
4.1
|
30.9
|
1.0
|
C13
|
A:TCL262
|
4.1
|
36.0
|
1.0
|
CA
|
A:ALA92
|
4.1
|
30.1
|
1.0
|
O3
|
A:NAD261
|
4.2
|
33.1
|
1.0
|
C5
|
A:TCL262
|
4.4
|
32.6
|
1.0
|
O4B
|
A:NAD261
|
4.4
|
35.2
|
1.0
|
C5D
|
A:NAD261
|
4.5
|
30.3
|
1.0
|
PN
|
A:NAD261
|
4.5
|
28.5
|
1.0
|
O3D
|
A:NAD261
|
4.5
|
27.2
|
1.0
|
C4D
|
A:NAD261
|
4.6
|
31.3
|
1.0
|
O5B
|
A:NAD261
|
4.6
|
33.3
|
1.0
|
C12
|
A:TCL262
|
4.6
|
35.0
|
1.0
|
C4B
|
A:NAD261
|
4.6
|
30.6
|
1.0
|
O1N
|
A:NAD261
|
4.7
|
34.5
|
1.0
|
O1A
|
A:NAD261
|
4.8
|
35.0
|
1.0
|
PA
|
A:NAD261
|
4.9
|
30.6
|
1.0
|
C
|
A:ILE91
|
4.9
|
28.9
|
1.0
|
CA
|
A:ALA196
|
5.0
|
40.3
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 3nrc
Go back to
Chlorine Binding Sites List in 3nrc
Chlorine binding site 4 out
of 6 in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl262
b:30.9
occ:1.00
|
CL14
|
B:TCL262
|
0.0
|
30.9
|
1.0
|
C2
|
B:TCL262
|
1.7
|
27.9
|
1.0
|
C1
|
B:TCL262
|
2.7
|
26.6
|
1.0
|
C3
|
B:TCL262
|
2.7
|
29.5
|
1.0
|
O7N
|
B:NAD261
|
3.4
|
31.8
|
1.0
|
CZ
|
B:TYR146
|
3.5
|
30.9
|
1.0
|
CE1
|
B:TYR146
|
3.7
|
28.9
|
1.0
|
OH
|
B:TYR146
|
3.8
|
36.9
|
1.0
|
CE1
|
B:PHE203
|
3.9
|
35.9
|
1.0
|
CE2
|
B:TYR146
|
3.9
|
29.4
|
1.0
|
CD1
|
B:PHE203
|
4.0
|
41.6
|
1.0
|
C6
|
B:TCL262
|
4.0
|
29.1
|
1.0
|
C4
|
B:TCL262
|
4.0
|
32.3
|
1.0
|
C7N
|
B:NAD261
|
4.1
|
32.1
|
1.0
|
CA
|
B:PRO191
|
4.1
|
33.6
|
1.0
|
CD1
|
B:TYR146
|
4.1
|
28.5
|
1.0
|
C4N
|
B:NAD261
|
4.2
|
30.3
|
1.0
|
CB
|
B:PRO191
|
4.3
|
34.9
|
1.0
|
CD2
|
B:TYR146
|
4.3
|
28.1
|
1.0
|
C3N
|
B:NAD261
|
4.4
|
28.6
|
1.0
|
CG
|
B:TYR146
|
4.5
|
27.2
|
1.0
|
SD
|
B:MET206
|
4.5
|
60.2
|
1.0
|
C5
|
B:TCL262
|
4.5
|
30.9
|
1.0
|
CE
|
B:MET206
|
4.8
|
53.0
|
1.0
|
N
|
B:PRO191
|
4.8
|
38.1
|
1.0
|
CG
|
B:PRO191
|
4.8
|
38.1
|
1.0
|
CE1
|
B:TYR156
|
5.0
|
21.8
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 3nrc
Go back to
Chlorine Binding Sites List in 3nrc
Chlorine binding site 5 out
of 6 in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl262
b:36.4
occ:1.00
|
CL15
|
B:TCL262
|
0.0
|
36.4
|
1.0
|
C11
|
B:TCL262
|
1.7
|
32.1
|
1.0
|
C10
|
B:TCL262
|
2.7
|
30.7
|
1.0
|
C12
|
B:TCL262
|
2.7
|
33.8
|
1.0
|
N
|
B:ALA94
|
3.3
|
30.1
|
1.0
|
O
|
B:ALA94
|
3.4
|
36.5
|
1.0
|
CD1
|
B:LEU99
|
3.7
|
33.4
|
1.0
|
CA
|
B:PHE93
|
3.9
|
30.8
|
1.0
|
CD1
|
B:PHE93
|
4.0
|
37.1
|
1.0
|
C9
|
B:TCL262
|
4.0
|
34.7
|
1.0
|
C13
|
B:TCL262
|
4.0
|
30.2
|
1.0
|
C
|
B:PHE93
|
4.1
|
30.9
|
1.0
|
C
|
B:ALA94
|
4.2
|
34.2
|
1.0
|
CA
|
B:ALA94
|
4.3
|
35.0
|
1.0
|
CE1
|
B:PHE93
|
4.5
|
41.2
|
1.0
|
C8
|
B:TCL262
|
4.5
|
28.1
|
1.0
|
CG
|
B:PHE93
|
4.6
|
33.2
|
1.0
|
CB
|
B:PHE93
|
4.7
|
30.6
|
1.0
|
CB
|
B:ALA94
|
4.7
|
27.9
|
1.0
|
N
|
B:PHE93
|
4.8
|
32.5
|
1.0
|
O
|
B:ALA92
|
4.8
|
34.9
|
1.0
|
CG
|
B:LEU99
|
5.0
|
36.3
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 3nrc
Go back to
Chlorine Binding Sites List in 3nrc
Chlorine binding site 6 out
of 6 in the Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad+ and Triclosan within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl262
b:41.0
occ:1.00
|
CL16
|
B:TCL262
|
0.0
|
41.0
|
1.0
|
C9
|
B:TCL262
|
1.7
|
34.7
|
1.0
|
C10
|
B:TCL262
|
2.7
|
30.7
|
1.0
|
C8
|
B:TCL262
|
2.8
|
28.1
|
1.0
|
O7
|
B:TCL262
|
3.0
|
31.6
|
1.0
|
C3D
|
B:NAD261
|
3.4
|
26.8
|
1.0
|
O5D
|
B:NAD261
|
3.5
|
30.0
|
1.0
|
CB
|
B:ALA196
|
3.5
|
34.6
|
1.0
|
C2D
|
B:NAD261
|
3.5
|
24.8
|
1.0
|
C5B
|
B:NAD261
|
3.5
|
30.0
|
1.0
|
O
|
B:ALA92
|
3.6
|
34.9
|
1.0
|
CB
|
B:ALA92
|
3.7
|
29.7
|
1.0
|
O2D
|
B:NAD261
|
3.8
|
26.3
|
1.0
|
N
|
B:ALA92
|
3.8
|
30.4
|
1.0
|
CA
|
B:ALA92
|
4.0
|
32.7
|
1.0
|
C
|
B:ALA92
|
4.0
|
32.7
|
1.0
|
C11
|
B:TCL262
|
4.1
|
32.1
|
1.0
|
O3
|
B:NAD261
|
4.1
|
35.3
|
1.0
|
C13
|
B:TCL262
|
4.1
|
30.2
|
1.0
|
C5
|
B:TCL262
|
4.4
|
30.9
|
1.0
|
PN
|
B:NAD261
|
4.4
|
30.3
|
1.0
|
O3D
|
B:NAD261
|
4.4
|
25.5
|
1.0
|
O5B
|
B:NAD261
|
4.4
|
38.0
|
1.0
|
C5D
|
B:NAD261
|
4.4
|
28.9
|
1.0
|
C4D
|
B:NAD261
|
4.4
|
27.6
|
1.0
|
O4B
|
B:NAD261
|
4.5
|
35.1
|
1.0
|
C4B
|
B:NAD261
|
4.6
|
29.3
|
1.0
|
C12
|
B:TCL262
|
4.6
|
33.8
|
1.0
|
O1N
|
B:NAD261
|
4.6
|
33.1
|
1.0
|
C
|
B:ILE91
|
4.7
|
29.1
|
1.0
|
PA
|
B:NAD261
|
4.9
|
29.9
|
1.0
|
C1D
|
B:NAD261
|
4.9
|
26.8
|
1.0
|
O1A
|
B:NAD261
|
4.9
|
33.8
|
1.0
|
CA
|
B:ALA196
|
5.0
|
36.4
|
1.0
|
|
Reference:
S.Mehboob,
K.Truong,
B.D.Santarsiero,
M.E.Johnson.
Structure of the Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) in Complex with Nad(+) and Triclosan. Acta Crystallogr.,Sect.F V. 66 1436 2010.
ISSN: ISSN 1744-3091
PubMed: 21045289
DOI: 10.1107/S1744309110039862
Page generated: Sun Jul 21 01:09:37 2024
|