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Chlorine in PDB 3o2k: Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate

Protein crystallography data

The structure of Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate, PDB code: 3o2k was solved by M.Jost, G.E.Zocher, T.Stehle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.40
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 82.770, 82.770, 124.260, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 23.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate (pdb code 3o2k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate, PDB code: 3o2k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3o2k

Go back to Chlorine Binding Sites List in 3o2k
Chlorine binding site 1 out of 2 in the Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl476

b:61.2
occ:0.50
N A:LYS165 3.5 61.7 1.0
CB A:THR164 3.7 60.8 1.0
CG A:LYS165 3.9 64.5 1.0
CA A:THR164 3.9 59.0 1.0
CB A:LYS165 4.1 64.6 1.0
C A:THR164 4.2 60.4 1.0
CG2 A:THR164 4.3 59.8 1.0
CA A:LYS165 4.4 63.3 1.0
OG1 A:THR164 4.9 61.5 1.0

Chlorine binding site 2 out of 2 in 3o2k

Go back to Chlorine Binding Sites List in 3o2k
Chlorine binding site 2 out of 2 in the Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Brevianamide F Prenyltransferase Complexed with Brevianamide F and Dimethylallyl S-Thiolodiphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl477

b:56.3
occ:0.50
NZ A:LYS392 3.7 71.8 1.0
N A:ASN389 4.1 62.0 1.0
CD A:LYS392 4.3 69.0 1.0
CA A:MET388 4.3 60.8 1.0
CB A:MET388 4.4 60.4 1.0
CE A:LYS392 4.6 70.7 1.0
CG A:MET388 4.7 60.3 1.0
C A:MET388 4.7 60.7 1.0
CB A:ASN389 4.8 63.9 1.0

Reference:

M.Jost, G.Zocher, S.Tarcz, M.Matuschek, X.Xie, S.M.Li, T.Stehle. Structure-Function Analysis of An Enzymatic Prenyl Transfer Reaction Identifies A Reaction Chamber with Modifiable Specificity. J.Am.Chem.Soc. V. 132 17849 2010.
ISSN: ISSN 0002-7863
PubMed: 21105662
DOI: 10.1021/JA106817C
Page generated: Sat Dec 12 09:58:48 2020

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