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Chlorine in PDB 3pbm: The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa

Enzymatic activity of The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa

All present enzymatic activity of The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa:
3.5.4.4;

Protein crystallography data

The structure of The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa, PDB code: 3pbm was solved by Z.Zhang, S.K.Burley, S.Swaminathan, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.35 / 2.59
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.685, 74.103, 178.215, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 23.2

Other elements in 3pbm:

The structure of The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa (pdb code 3pbm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa, PDB code: 3pbm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3pbm

Go back to Chlorine Binding Sites List in 3pbm
Chlorine binding site 1 out of 2 in the The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl328

b:31.1
occ:1.00
CL01 A:ES4328 0.0 31.1 1.0
C02 A:ES4328 1.7 20.1 1.0
ZN A:ZN327 2.4 24.1 1.0
C10 A:ES4328 2.6 18.0 1.0
N03 A:ES4328 2.6 20.1 1.0
OD2 A:ASP277 3.0 23.4 1.0
NE2 A:HIS220 3.0 19.4 1.0
N09 A:ES4328 3.1 18.5 1.0
NE2 A:HIS196 3.3 18.1 1.0
OD1 A:ASP277 3.3 21.8 1.0
OE2 A:GLU199 3.3 22.2 1.0
CG A:ASP277 3.5 21.0 1.0
CD2 A:HIS196 3.5 16.3 1.0
OE1 A:GLU199 3.7 18.1 1.0
CD2 A:HIS220 3.8 18.4 1.0
CD A:GLU199 3.9 20.5 1.0
C06 A:ES4328 3.9 17.5 1.0
C04 A:ES4328 3.9 20.2 1.0
NE2 A:HIS18 4.0 18.9 1.0
CE1 A:HIS220 4.0 22.6 1.0
OD2 A:ASP278 4.1 16.8 1.0
NE2 A:HIS16 4.1 19.7 1.0
N05 A:ES4328 4.4 24.3 1.0
C08 A:ES4328 4.5 19.5 1.0
CE1 A:HIS196 4.5 16.8 1.0
CD2 A:HIS18 4.6 16.7 1.0
OG A:SER247 4.7 22.0 1.0
CE1 A:HIS16 4.7 17.3 1.0
CE1 A:HIS18 4.8 17.1 1.0
CG A:HIS196 4.9 15.4 1.0
N07 A:ES4328 4.9 17.8 1.0
CB A:ASP277 5.0 16.7 1.0

Chlorine binding site 2 out of 2 in 3pbm

Go back to Chlorine Binding Sites List in 3pbm
Chlorine binding site 2 out of 2 in the The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl328

b:42.4
occ:1.00
CL01 B:ES4328 0.0 42.4 1.0
C02 B:ES4328 1.7 23.1 1.0
ZN B:ZN327 2.5 26.7 1.0
C10 B:ES4328 2.6 21.0 1.0
N03 B:ES4328 2.6 22.2 1.0
OD2 B:ASP277 2.8 24.3 1.0
NE2 B:HIS220 3.0 22.4 1.0
N09 B:ES4328 3.2 21.0 1.0
OD1 B:ASP277 3.2 19.8 1.0
CG B:ASP277 3.4 20.0 1.0
OE2 B:GLU199 3.5 23.3 1.0
OE1 B:GLU199 3.8 21.3 1.0
NE2 B:HIS196 3.8 17.4 1.0
CD2 B:HIS196 3.9 18.6 1.0
CE1 B:HIS220 3.9 22.6 1.0
C06 B:ES4328 3.9 20.8 1.0
CD B:GLU199 3.9 23.5 1.0
OD2 B:ASP278 4.0 20.9 1.0
C04 B:ES4328 4.0 23.9 1.0
CD2 B:HIS220 4.0 22.6 1.0
NE2 B:HIS18 4.1 19.1 1.0
NE2 B:HIS16 4.3 17.3 1.0
OG B:SER247 4.3 17.5 1.0
N05 B:ES4328 4.4 22.2 1.0
C08 B:ES4328 4.6 20.2 1.0
CD2 B:HIS18 4.6 18.8 1.0
CD1 B:LEU56 4.8 21.2 1.0
CB B:ASP277 4.9 20.2 1.0
CE1 B:HIS16 4.9 21.0 1.0
N07 B:ES4328 4.9 19.7 1.0

Reference:

Z.Zhang, S.K.Burley, S.Swaminathan. The Crystal Structure of Adenosine Deaminase in Complex with Chloropurine From Pseudomonas Aeruginosa To Be Published.
Page generated: Sat Dec 12 10:02:03 2020

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