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Chlorine in PDB 3pei: Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis

Enzymatic activity of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis

All present enzymatic activity of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis:
3.4.11.1;

Protein crystallography data

The structure of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis, PDB code: 3pei was solved by N.Maltseva, Y.Kim, M.Gu, W.F.Anderson, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.70
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 161.483, 161.483, 105.270, 90.00, 90.00, 120.00
R / Rfree (%) 16.5 / 21

Other elements in 3pei:

The structure of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis also contains other interesting chemical elements:

Potassium (K) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis (pdb code 3pei). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis, PDB code: 3pei:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 3pei

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Chlorine binding site 1 out of 5 in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl494

b:53.6
occ:1.00
 O A:HOH698 2.9 94.8 1.0
O A:HOH730 3.1 78.5 1.0
O1 A:EDO491 3.7 65.9 1.0
CD A:PRO293 4.0 45.4 1.0
CD2 A:LEU292 4.0 41.6 1.0
CG A:LYS479 4.0 64.1 1.0
CB A:ALA478 4.1 44.6 1.0
C1 A:EDO491 4.1 66.9 1.0
CG A:PRO293 4.2 42.8 1.0
N A:LYS479 4.5 60.3 1.0
O A:ILE475 4.5 40.6 1.0
C A:ALA478 4.6 55.6 1.0
CG2 A:ILE475 4.7 33.6 1.0
CA A:LYS479 4.8 64.4 1.0
CE A:LYS479 4.9 74.5 1.0
O A:ALA478 5.0 57.4 1.0
CB A:LYS479 5.0 60.6 1.0

Chlorine binding site 2 out of 5 in 3pei

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Chlorine binding site 2 out of 5 in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl496

b:52.8
occ:1.00
 O A:HOH736 3.1 69.5 1.0
NE A:ARG336 3.3 39.7 1.0
O A:HOH735 3.5 66.3 1.0
CD1 A:LEU360 3.5 27.8 1.0
O A:LEU360 3.5 51.1 1.0
N A:ARG336 3.6 45.1 1.0
NH2 A:ARG336 3.7 43.1 1.0
N A:GLY335 3.8 46.6 1.0
O A:ALA333 3.8 62.8 1.0
CA A:ALA333 3.8 59.3 1.0
C A:ALA333 3.8 58.5 1.0
CA A:GLY335 3.9 40.4 1.0
CG A:LEU360 3.9 33.0 1.0
CZ A:ARG336 4.0 40.5 1.0
CG A:ARG336 4.1 42.7 1.0
O A:HOH819 4.1 75.8 1.0
C A:GLY335 4.2 43.5 1.0
CB A:ARG336 4.3 41.1 1.0
CD A:ARG336 4.3 40.0 1.0
CB A:ALA333 4.4 62.7 1.0
C A:LEU360 4.5 44.4 1.0
CA A:ARG336 4.5 42.4 1.0
N A:GLU334 4.5 59.1 1.0
O A:ASP332 4.6 79.4 1.0
CA A:LEU360 4.7 41.0 1.0
C A:GLU334 4.8 52.1 1.0
CB A:LEU360 4.9 35.1 1.0
N A:ALA333 5.0 67.1 1.0

Chlorine binding site 3 out of 5 in 3pei

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Chlorine binding site 3 out of 5 in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl498

b:85.6
occ:1.00
 O A:HOH836 2.7 95.5 1.0
O A:HOH771 3.1 85.4 1.0
O A:HOH687 3.4 52.8 1.0
O A:HOH858 3.6 79.8 1.0
O A:ASP441 3.9 53.4 1.0
C A:ASP441 4.1 47.3 1.0
C A:TYR442 4.2 40.4 1.0
O A:TYR442 4.2 42.3 1.0
N A:GLU443 4.4 37.5 1.0
O A:GLU440 4.5 45.8 1.0
N A:TYR442 4.5 43.9 1.0
CA A:TYR442 4.7 42.7 1.0
CA A:ASP441 4.7 46.3 1.0
CG A:GLU443 4.8 54.4 1.0
O A:HOH716 4.9 84.1 1.0

Chlorine binding site 4 out of 5 in 3pei

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Chlorine binding site 4 out of 5 in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:47.7
occ:1.00
 O A:HOH770 2.5 69.3 1.0
ND2 A:ASN167 3.4 33.0 1.0
O A:HOH705 3.5 38.0 1.0
O A:HOH768 3.7 62.9 1.0
C1 A:EDO507 3.8 74.9 1.0
CB A:ASN167 4.0 26.2 1.0
O1 A:EDO507 4.2 76.0 1.0
CG A:ASN167 4.2 30.1 1.0
CG2 A:ILE121 4.2 22.7 1.0
CA A:CYS164 4.2 32.0 1.0
SG A:CYS164 4.4 81.5 1.0
O A:HOH769 4.5 55.5 1.0
O A:HOH706 4.6 58.1 1.0
CB A:CYS164 4.6 31.4 1.0
O A:ALA163 4.7 36.2 1.0
O A:CYS164 4.8 28.7 1.0
N A:CYS164 4.9 28.5 1.0

Chlorine binding site 5 out of 5 in 3pei

Go back to Chlorine Binding Sites List in 3pei
Chlorine binding site 5 out of 5 in the Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl514

b:37.4
occ:1.00
 O A:HOH785 3.5 51.2 1.0
O A:HOH851 3.9 73.1 1.0
CA A:GLY427 4.0 34.7 1.0
CB A:ALA363 4.1 38.0 1.0
CB A:THR361 4.4 45.5 1.0
C A:GLY427 4.4 36.4 1.0
O A:HOH548 4.5 42.7 1.0
CG2 A:THR361 4.5 38.5 1.0
K A:K495 4.6 48.2 1.0
CG A:ARG424 4.6 62.9 0.4
N A:ALA363 4.7 43.5 1.0
O A:ARG424 4.7 53.3 0.6
O A:GLY427 4.8 40.6 1.0
O A:ARG424 4.8 53.0 0.4
CB A:ARG424 4.8 58.5 0.4
CA A:ARG424 4.9 54.5 0.4
CA A:ALA363 5.0 41.0 1.0
N A:SER428 5.0 30.1 1.0

Reference:

N.Maltseva, Y.Kim, M.Gu, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Cytosol Aminopeptidase From Francisella Tularensis To Be Published.
Page generated: Sun Jul 21 02:19:22 2024

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